Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL445264.1-201ENST00000621719 171 ntBASIC3.36□□□□□ -1.87
NPIPA3F8WFD2 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.36□□□□□ -1.87
NPIPA3F8WFD2 AC119674.1-207ENST00000641355 633 ntBASIC3.36□□□□□ -1.87
NPIPA3F8WFD2 LINC00561-201ENST00000565815 2738 ntBASIC3.36□□□□□ -1.87
NPIPA3F8WFD2 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
NPIPA3F8WFD2 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NPIPA3F8WFD2 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPIPA3F8WFD2 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NPIPA3F8WFD2 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.36□□□□□ -1.87
NPIPA3F8WFD2 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.36□□□□□ -1.87
NPIPA3F8WFD2 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 MIR423-201ENST00000362201 94 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 RNU6-1200P-201ENST00000384162 107 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 MTND4P13-201ENST00000402078 1023 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 HSPE1P26-201ENST00000405341 275 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 HSPE1P8-201ENST00000406997 288 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 TXNL1P1-201ENST00000429528 554 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 AL365396.1-201ENST00000430854 671 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 SNRPEP7-201ENST00000438350 220 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 AL117351.1-201ENST00000438864 766 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 MTND1P31-201ENST00000449206 961 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 AC104978.1-201ENST00000449387 391 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 snoU13.4-201ENST00000458916 104 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 TMED11P-201ENST00000479478 690 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 AC096751.1-202ENST00000502691 1067 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 AC021146.5-201ENST00000503544 545 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 UBTFL10-201ENST00000528532 562 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 ELOCP32-201ENST00000548625 324 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 ZNF321P-202ENST00000550843 495 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 ZNF192P1-203ENST00000565888 810 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 SNORD84-203ENST00000584275 78 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 MIR4999-201ENST00000585029 91 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 MIR3922-201ENST00000585192 84 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 DUXAP11-201ENST00000603858 526 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 AC010591.1-201ENST00000603941 649 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 AC012468.1-201ENST00000604888 430 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 AC092354.2-201ENST00000607786 514 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 AL357559.1-201ENST00000622228 274 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 AP002791.1-201ENST00000623291 381 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 AC048347.1-201ENST00000624621 427 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 AC006504.1-201ENST00000562493 3666 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 AP000526.1-201ENST00000603308 1388 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 DDX43P2-201ENST00000604753 1354 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 HSPA8P1-201ENST00000425843 1833 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 NCAPGP1-201ENST00000505112 1814 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 AC104454.1-201ENST00000421341 1401 ntBASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NPIPA3F8WFD2 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 RNU6-777P-201ENST00000364265 104 ntBASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 TAS2R15P-201ENST00000390674 928 ntBASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 CYCSP45-201ENST00000402289 315 ntBASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 RHEBP3-201ENST00000411920 351 ntBASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 AC083875.1-201ENST00000419509 405 ntBASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 AC099677.1-201ENST00000420575 175 ntBASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 AL022400.1-201ENST00000423946 935 ntBASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 RNU7-170P-201ENST00000459303 61 ntBASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 MLLT10P2-201ENST00000506434 249 ntBASIC3.34□□□□□ -1.87
NPIPA3F8WFD2 KLHL2P1-201ENST00000508691 521 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms