Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 RNU6-263P-201ENST00000363811 107 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 snoZ40.1-201ENST00000364540 72 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 RNU6-805P-201ENST00000365643 106 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 SNORA18.3-201ENST00000384122 132 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 U3.42-201ENST00000408746 214 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 VN1R51P-201ENST00000411675 945 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 HMGB3P23-201ENST00000414981 585 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 AC245054.2-201ENST00000415639 319 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 DUTP6-201ENST00000425573 462 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 AL035410.1-201ENST00000427409 427 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 RPL21P40-201ENST00000428586 483 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 GTF2IP7-202ENST00000436677 309 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 AC093156.1-201ENST00000440382 670 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 AL358794.1-201ENST00000445689 381 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 EXOSC3P1-201ENST00000448649 500 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 AC010468.1-201ENST00000461022 817 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 AC078785.3-201ENST00000476607 425 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 NCOR1P1-202ENST00000486162 291 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 OR5H5P-201ENST00000503164 928 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 AC091826.1-201ENST00000514065 313 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 OR4A45P-201ENST00000529954 901 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 AL389895.1-201ENST00000554127 252 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 MTND3P13-201ENST00000574391 343 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 AC006504.3-201ENST00000586818 523 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 GAS5-AS1-201ENST00000602767 694 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 AL160237.3-201ENST00000604114 1013 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 AC091946.2-201ENST00000606105 291 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 AC068722.2-201ENST00000618734 544 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 ZNF663P-202ENST00000641770 1131 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 AC130650.2-201ENST00000618736 2403 ntBASIC3.13□□□□□ -1.91
SMIM28A0A1B0GU29 ZNF37BP-203ENST00000452306 1352 ntBASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 AP001148.1-201ENST00000624124 2359 ntBASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 SUGT1P1-201ENST00000379514 476 ntBASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 Y_RNA.408-201ENST00000383987 102 ntBASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 Y_RNA.510-201ENST00000384511 114 ntBASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 MTCO2P23-201ENST00000425216 680 ntBASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 OR2AS1P-201ENST00000427827 319 ntBASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 RPS20P5-201ENST00000434808 360 ntBASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 AC004854.1-201ENST00000440356 349 ntBASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 OR10R1P-201ENST00000441524 1141 ntBASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 AC125238.1-201ENST00000448842 249 ntBASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 CFTRP1-201ENST00000456646 183 ntBASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 snoU109.3-201ENST00000459477 145 ntBASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 RPL23AP14-201ENST00000468281 468 ntBASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 UBE2V1P12-201ENST00000503954 474 ntBASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 KCTD9P5-201ENST00000504141 1170 ntBASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 AC111000.2-201ENST00000507775 550 ntBASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 AC090116.1-201ENST00000615679 446 ntBASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 U73479.1-201ENST00000618062 168 ntBASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 AL512506.2-201ENST00000624472 458 ntBASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 AC026634.1-201ENST00000634369 198 ntBASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 MIR7153-201ENST00000637758 57 ntBASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SMIM28A0A1B0GU29 DBF4P1-201ENST00000412976 1892 ntBASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 RNU6-989P-201ENST00000362756 107 ntBASIC3.11□□□□□ -1.91
SMIM28A0A1B0GU29 SNORA51.2-201ENST00000364595 132 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms