Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC1.93□□□□□ -2.1
TRAV30A0A087WSZ9 ATP1B3P1-201ENST00000605365 821 ntBASIC1.93□□□□□ -2.1
TRAV30A0A087WSZ9 AC009570.1-201ENST00000609599 745 ntBASIC1.93□□□□□ -2.1
TRAV30A0A087WSZ9 AL138880.2-201ENST00000616214 239 ntBASIC1.93□□□□□ -2.1
TRAV30A0A087WSZ9 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC1.93□□□□□ -2.1
TRAV30A0A087WSZ9 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC1.93□□□□□ -2.1
TRAV30A0A087WSZ9 ZNF37BP-203ENST00000452306 1352 ntBASIC1.93□□□□□ -2.1
TRAV30A0A087WSZ9 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
TRAV30A0A087WSZ9 AL049780.3-201ENST00000624612 1583 ntBASIC1.93□□□□□ -2.1
TRAV30A0A087WSZ9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
TRAV30A0A087WSZ9 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.92□□□□□ -2.1
TRAV30A0A087WSZ9 HMGB1P5-201ENST00000255320 642 ntBASIC1.92□□□□□ -2.1
TRAV30A0A087WSZ9 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
TRAV30A0A087WSZ9 RNU2-21P-201ENST00000410368 188 ntBASIC1.92□□□□□ -2.1
TRAV30A0A087WSZ9 RPL21P32-201ENST00000419877 477 ntBASIC1.92□□□□□ -2.1
TRAV30A0A087WSZ9 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.92□□□□□ -2.1
TRAV30A0A087WSZ9 ARL5AP4-201ENST00000430731 512 ntBASIC1.92□□□□□ -2.1
TRAV30A0A087WSZ9 MRPS33P4-201ENST00000434892 317 ntBASIC1.92□□□□□ -2.1
TRAV30A0A087WSZ9 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
TRAV30A0A087WSZ9 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.92□□□□□ -2.1
TRAV30A0A087WSZ9 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.92□□□□□ -2.1
TRAV30A0A087WSZ9 snoU13.4-201ENST00000458916 104 ntBASIC1.92□□□□□ -2.1
TRAV30A0A087WSZ9 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.92□□□□□ -2.1
TRAV30A0A087WSZ9 RN7SKP24-201ENST00000515888 284 ntBASIC1.92□□□□□ -2.1
TRAV30A0A087WSZ9 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.92□□□□□ -2.1
TRAV30A0A087WSZ9 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.92□□□□□ -2.1
TRAV30A0A087WSZ9 AC025281.1-201ENST00000567026 265 ntBASIC1.92□□□□□ -2.1
TRAV30A0A087WSZ9 MTND4LP24-201ENST00000572277 291 ntBASIC1.92□□□□□ -2.1
TRAV30A0A087WSZ9 RPS3AP23-202ENST00000574601 686 ntBASIC1.92□□□□□ -2.1
TRAV30A0A087WSZ9 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.92□□□□□ -2.1
TRAV30A0A087WSZ9 MIR4658-201ENST00000584344 65 ntBASIC1.92□□□□□ -2.1
TRAV30A0A087WSZ9 AC245100.7-201ENST00000609678 442 ntBASIC1.92□□□□□ -2.1
TRAV30A0A087WSZ9 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
TRAV30A0A087WSZ9 AC018755.4-201ENST00000619715 454 ntBASIC1.92□□□□□ -2.1
TRAV30A0A087WSZ9 CYP3A51P-201ENST00000633513 256 ntBASIC1.92□□□□□ -2.1
TRAV30A0A087WSZ9 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
TRAV30A0A087WSZ9 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
TRAV30A0A087WSZ9 OR5J1P-201ENST00000313544 939 ntBASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 AL355497.1-201ENST00000406262 551 ntBASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 U3.40-201ENST00000408706 208 ntBASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 AC000041.1-201ENST00000439655 175 ntBASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 AL590664.1-201ENST00000448065 339 ntBASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 AC096992.1-201ENST00000459808 709 ntBASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 AC015908.1-201ENST00000478739 476 ntBASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 AC097462.2-201ENST00000504623 481 ntBASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 SLC25A15P5-201ENST00000508033 253 ntBASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 AC026801.2-201ENST00000515352 425 ntBASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 RNA5SP24-201ENST00000516478 95 ntBASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 AL035413.2-201ENST00000604801 525 ntBASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 AL136363.1-201ENST00000605349 337 ntBASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 OR2AS2P-201ENST00000606902 342 ntBASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 AC110079.1-202ENST00000635213 138 ntBASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 AC104446.1-201ENST00000613728 1321 ntBASIC1.91□□□□□ -2.1
TRAV30A0A087WSZ9 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
TRAV30A0A087WSZ9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.9□□□□□ -2.1
TRAV30A0A087WSZ9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.9□□□□□ -2.1
TRAV30A0A087WSZ9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.9□□□□□ -2.11
TRAV30A0A087WSZ9 RPL21P132-201ENST00000331267 462 ntBASIC1.9□□□□□ -2.11
TRAV30A0A087WSZ9 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.9□□□□□ -2.11
TRAV30A0A087WSZ9 MIR196B-201ENST00000384852 84 ntBASIC1.9□□□□□ -2.11
TRAV30A0A087WSZ9 MIR491-201ENST00000384877 84 ntBASIC1.9□□□□□ -2.11
TRAV30A0A087WSZ9 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TRAV30A0A087WSZ9 MIR1250-201ENST00000408098 113 ntBASIC1.9□□□□□ -2.11
TRAV30A0A087WSZ9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.9□□□□□ -2.11
TRAV30A0A087WSZ9 HMGB3P2-201ENST00000411913 584 ntBASIC1.9□□□□□ -2.11
TRAV30A0A087WSZ9 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.9□□□□□ -2.11
TRAV30A0A087WSZ9 AL158825.1-201ENST00000414735 521 ntBASIC1.9□□□□□ -2.11
TRAV30A0A087WSZ9 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.9□□□□□ -2.11
TRAV30A0A087WSZ9 FNDC3CP-201ENST00000420795 1155 ntBASIC1.9□□□□□ -2.11
TRAV30A0A087WSZ9 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.9□□□□□ -2.11
TRAV30A0A087WSZ9 TRGV7-201ENST00000427089 353 ntBASIC1.9□□□□□ -2.11
TRAV30A0A087WSZ9 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC1.9□□□□□ -2.11
TRAV30A0A087WSZ9 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.9□□□□□ -2.11
TRAV30A0A087WSZ9 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.9□□□□□ -2.11
TRAV30A0A087WSZ9 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.9□□□□□ -2.11
TRAV30A0A087WSZ9 AC090515.1-201ENST00000465295 476 ntBASIC1.9□□□□□ -2.11
TRAV30A0A087WSZ9 AL135752.1-201ENST00000479477 471 ntBASIC1.9□□□□□ -2.11
TRAV30A0A087WSZ9 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TRAV30A0A087WSZ9 SNORA31.20-201ENST00000517111 133 ntBASIC1.9□□□□□ -2.11
TRAV30A0A087WSZ9 OR10V3P-201ENST00000525712 725 ntBASIC1.9□□□□□ -2.11
TRAV30A0A087WSZ9 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC1.9□□□□□ -2.11
TRAV30A0A087WSZ9 AC093014.1-201ENST00000548926 724 ntBASIC1.9□□□□□ -2.11
TRAV30A0A087WSZ9 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms