Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 AC009812.4-201ENST00000569134 1805 ntBASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 GNG5P1-201ENST00000255500 204 ntBASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 OR5H15-201ENST00000383696 930 ntBASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 RNA5SP146-201ENST00000410743 123 ntBASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 RSL24D1P6-201ENST00000426934 401 ntBASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 AC024082.2-201ENST00000434771 238 ntBASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 TIMM9P1-201ENST00000436122 256 ntBASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 RABEPKP1-201ENST00000440529 1026 ntBASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 AL022238.1-201ENST00000442557 355 ntBASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 AC244505.5-201ENST00000443639 207 ntBASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 VN1R17P-201ENST00000472048 1090 ntBASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 IGKV2D-23-201ENST00000518179 286 ntBASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 DEFB108A-201ENST00000530110 222 ntBASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 AC125611.2-201ENST00000551907 647 ntBASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 AC007687.1-201ENST00000602704 304 ntBASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 DUXAP4-201ENST00000603046 613 ntBASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 AC079089.3-201ENST00000603094 673 ntBASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 PISRT1-201ENST00000626175 531 ntBASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 AC105074.1-201ENST00000623380 3095 ntBASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 NEAT1-202ENST00000501122 22743 ntBASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 MTND4P26-201ENST00000415971 1359 ntBASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 AC092104.1-201ENST00000497346 1441 ntBASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 AC092326.2-201ENST00000624772 1561 ntBASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
COL4A3BPQ9Y5P4 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 AC067945.1-201ENST00000342609 618 ntBASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 RNU5E-8P-201ENST00000363502 116 ntBASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 Y_RNA.359-201ENST00000365498 102 ntBASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 RNU6-297P-201ENST00000384636 107 ntBASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 DEFB108C-201ENST00000400154 252 ntBASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 SNORA11F-201ENST00000408237 128 ntBASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 RNU6-248P-201ENST00000410720 107 ntBASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 RPS11P1-201ENST00000451072 473 ntBASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 RPL36AP13-201ENST00000457490 317 ntBASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 TPTE2P5-203ENST00000458118 728 ntBASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 MTND1P3-201ENST00000484956 952 ntBASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 RN7SKP298-201ENST00000515950 94 ntBASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 RN7SKP244-201ENST00000516513 307 ntBASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 SNORA18.6-201ENST00000516792 115 ntBASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 AP003122.4-201ENST00000530980 758 ntBASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 MIR3690-201ENST00000580266 75 ntBASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 AC087683.1-201ENST00000591187 441 ntBASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 AP001330.4-201ENST00000604350 154 ntBASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 AC090578.1-201ENST00000604955 591 ntBASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 AC008277.2-201ENST00000605196 797 ntBASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 AC103591.3-201ENST00000608684 209 ntBASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 AC004067.1-201ENST00000608733 700 ntBASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 AC006566.1-201ENST00000608943 513 ntBASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 AP000254.1-201ENST00000609934 520 ntBASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 AC084782.3-201ENST00000612282 578 ntBASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 AC140479.6-201ENST00000633535 357 ntBASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 AC055839.1-201ENST00000634467 498 ntBASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 AC024560.2-201ENST00000507981 1497 ntBASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.85□□□□□ -1.63
COL4A3BPQ9Y5P4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms