Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 USP9YP15-201ENST00000442391 422 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 UBDP1-202ENST00000457888 382 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 MTCO2P29-201ENST00000465212 189 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 RPL21P126-201ENST00000470049 478 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 AC023598.1-201ENST00000472521 361 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 AL139099.1-201ENST00000497398 403 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 AC010587.1-201ENST00000505809 469 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 AC010342.1-201ENST00000514047 877 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 FAM92A1P1-201ENST00000528023 890 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 HMGB3P26-201ENST00000560051 582 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 MIR3146-201ENST00000580367 79 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 SLC25A36P1-201ENST00000590111 465 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 VN1R85P-201ENST00000601587 426 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 LLPHP1-201ENST00000603571 367 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 AC055876.5-201ENST00000605667 259 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 AC099669.2-201ENST00000616549 437 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 AL732618.1-201ENST00000623251 301 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 AC027290.2-201ENST00000623210 18662 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHB1Q9Y5F3 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 CPHL1P-201ENST00000461341 3407 ntBASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 Y_RNA.303-201ENST00000364998 94 ntBASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 RNU4-12P-201ENST00000365233 139 ntBASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 MIR23B-201ENST00000384832 97 ntBASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 RPL7AP25-201ENST00000423357 805 ntBASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 AC002486.1-201ENST00000435098 391 ntBASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 Z99127.3-201ENST00000448158 395 ntBASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 AC132479.1-201ENST00000449160 144 ntBASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 FABP3P2-201ENST00000453169 399 ntBASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 RN7SL817P-201ENST00000480777 288 ntBASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 AC023194.1-201ENST00000493084 308 ntBASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 OR4R3P-201ENST00000525084 838 ntBASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 AC107954.1-201ENST00000565906 727 ntBASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 MIR548S-201ENST00000581352 82 ntBASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 UBE2L4-201ENST00000587688 464 ntBASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 KC877982.1-201ENST00000602313 470 ntBASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 AC090948.1-201ENST00000607464 549 ntBASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 OR6R2P-201ENST00000609216 300 ntBASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 AC012409.3-201ENST00000611343 981 ntBASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 AC114781.5-201ENST00000615297 108 ntBASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 ZYXP1-201ENST00000617638 118 ntBASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 AL158801.5-201ENST00000623123 465 ntBASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 AC022140.2-201ENST00000623500 188 ntBASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 AC090229.1-201ENST00000590983 1609 ntBASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 AL672167.1-203ENST00000641299 2975 ntBASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHB1Q9Y5F3 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 Y_RNA.1-201ENST00000352915 104 ntBASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 RNU5E-1-201ENST00000362477 120 ntBASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 RNU1-20P-201ENST00000363314 162 ntBASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 MIR134-201ENST00000385258 73 ntBASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 AC009237.10-201ENST00000414112 510 ntBASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms