Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
R3HCC1Q9Y3T6 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
R3HCC1Q9Y3T6 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
R3HCC1Q9Y3T6 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 SNORD74.4-201ENST00000364129 80 ntBASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 SNORA58B-201ENST00000364259 136 ntBASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 RNU6-1078P-201ENST00000364522 103 ntBASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 RPS4XP8-201ENST00000402039 771 ntBASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 FGF7P8-201ENST00000402994 292 ntBASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 AC114755.2-201ENST00000413520 361 ntBASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 AL807761.1-201ENST00000417622 171 ntBASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 OR1AA1P-201ENST00000419597 916 ntBASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 RPL7P54-201ENST00000438336 674 ntBASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 AL353748.1-201ENST00000440753 474 ntBASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 RPL7L1P1-201ENST00000448259 785 ntBASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 FDX1P2-201ENST00000450769 375 ntBASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 UBDP1-202ENST00000457888 382 ntBASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 SCARNA10-201ENST00000459255 330 ntBASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 AP003072.2-201ENST00000527756 676 ntBASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 CR383656.7-201ENST00000548164 174 ntBASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 AC020910.3-201ENST00000603701 874 ntBASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 Z84480.1-201ENST00000605131 311 ntBASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 AC090948.1-201ENST00000607464 549 ntBASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 AC020634.1-201ENST00000608701 549 ntBASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 AC012409.3-201ENST00000611343 981 ntBASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 AL049539.1-201ENST00000611964 459 ntBASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 DHX40P1-201ENST00000588725 1412 ntBASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 SAMMSON-226ENST00000642089 1582 ntBASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
R3HCC1Q9Y3T6 NMD3P1-201ENST00000439704 1488 ntBASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 OR52B1P-201ENST00000316506 909 ntBASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 Y_RNA.38-201ENST00000362617 102 ntBASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 RNY1P12-201ENST00000364251 105 ntBASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 RNA5SP513-201ENST00000364648 118 ntBASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 TBCAP2-201ENST00000416175 326 ntBASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 Z74021.1-201ENST00000423610 407 ntBASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 AL590762.4-201ENST00000425885 253 ntBASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 PSMD10P3-201ENST00000437000 448 ntBASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 snoU13.3-201ENST00000459441 104 ntBASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 RPS3AP41-201ENST00000462701 778 ntBASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 AC083982.1-201ENST00000485679 344 ntBASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 VWA8P1-201ENST00000510889 176 ntBASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 RNU6-1281P-201ENST00000516223 105 ntBASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 OR5D15P-201ENST00000531671 942 ntBASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 AL512782.1-201ENST00000603093 364 ntBASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 AC012669.1-201ENST00000603209 283 ntBASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 AC007621.1-201ENST00000604544 437 ntBASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 AL357078.3-201ENST00000607528 618 ntBASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 AC103710.2-201ENST00000609912 942 ntBASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 RMST_9.1-201ENST00000619945 193 ntBASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 AC067931.1-201ENST00000624190 671 ntBASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 CR381572.2-201ENST00000624852 397 ntBASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 SDAD1P1-202ENST00000524156 2051 ntBASIC5.27□□□□□ -1.57
R3HCC1Q9Y3T6 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
R3HCC1Q9Y3T6 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
R3HCC1Q9Y3T6 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
R3HCC1Q9Y3T6 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
R3HCC1Q9Y3T6 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms