Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
RNF11Q9Y3C5 NSRP1P1-201ENST00000444067 1693 ntBASIC2.31□□□□□ -2.04
RNF11Q9Y3C5 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RNF11Q9Y3C5 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RNF11Q9Y3C5 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.3□□□□□ -2.04
RNF11Q9Y3C5 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.3□□□□□ -2.04
RNF11Q9Y3C5 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.3□□□□□ -2.04
RNF11Q9Y3C5 snoU13.7-201ENST00000459220 104 ntBASIC2.3□□□□□ -2.04
RNF11Q9Y3C5 AC004924.1-201ENST00000480160 781 ntBASIC2.3□□□□□ -2.04
RNF11Q9Y3C5 HMGB1P22-201ENST00000505315 124 ntBASIC2.3□□□□□ -2.04
RNF11Q9Y3C5 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.3□□□□□ -2.04
RNF11Q9Y3C5 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.3□□□□□ -2.04
RNF11Q9Y3C5 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.3□□□□□ -2.04
RNF11Q9Y3C5 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.3□□□□□ -2.04
RNF11Q9Y3C5 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.3□□□□□ -2.04
RNF11Q9Y3C5 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.3□□□□□ -2.04
RNF11Q9Y3C5 AC027176.1-201ENST00000560204 514 ntBASIC2.3□□□□□ -2.04
RNF11Q9Y3C5 ISCA1P3-201ENST00000577104 373 ntBASIC2.3□□□□□ -2.04
RNF11Q9Y3C5 AC007621.1-201ENST00000604544 437 ntBASIC2.3□□□□□ -2.04
RNF11Q9Y3C5 HMGB1P51-201ENST00000605166 638 ntBASIC2.3□□□□□ -2.04
RNF11Q9Y3C5 AL359535.1-201ENST00000612100 1087 ntBASIC2.3□□□□□ -2.04
RNF11Q9Y3C5 AC091046.2-201ENST00000620775 665 ntBASIC2.3□□□□□ -2.04
RNF11Q9Y3C5 AC006963.1-201ENST00000624003 1052 ntBASIC2.3□□□□□ -2.04
RNF11Q9Y3C5 AC009950.2-201ENST00000636548 183 ntBASIC2.3□□□□□ -2.04
RNF11Q9Y3C5 AL136520.1-201ENST00000600311 1322 ntBASIC2.3□□□□□ -2.04
RNF11Q9Y3C5 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
RNF11Q9Y3C5 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
RNF11Q9Y3C5 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
RNF11Q9Y3C5 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RNF11Q9Y3C5 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 RNA5SP393-201ENST00000363423 117 ntBASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 RNU6-452P-201ENST00000384406 107 ntBASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 AL121972.1-201ENST00000402023 252 ntBASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 MTCO3P4-201ENST00000419236 787 ntBASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 FNDC3CP-201ENST00000420795 1155 ntBASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 AL513328.1-201ENST00000446460 224 ntBASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 AL031659.1-201ENST00000447075 539 ntBASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 OR51B8P-201ENST00000449892 769 ntBASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 AL035407.2-201ENST00000454090 378 ntBASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 SYPL1P1-201ENST00000473622 768 ntBASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 RPS4XP6-201ENST00000477670 797 ntBASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 GTF2IP9-201ENST00000502460 301 ntBASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 RPL7P20-201ENST00000520308 745 ntBASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 EIF4EP5-201ENST00000528228 640 ntBASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 OR4R2P-201ENST00000530815 597 ntBASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 AP001029.3-201ENST00000588063 596 ntBASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 AC020923.1-201ENST00000624021 917 ntBASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 MIR1291-201ENST00000627649 87 ntBASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 AC244517.1-201ENST00000606030 2086 ntBASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.29□□□□□ -2.04
RNF11Q9Y3C5 Z82195.2-201ENST00000612348 18351 ntBASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 FTLP6-201ENST00000355274 422 ntBASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 AC009963.1-201ENST00000417265 157 ntBASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 AL160175.1-201ENST00000428124 247 ntBASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 RPS7P2-201ENST00000435134 607 ntBASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 TPTE2P6-202ENST00000445572 1007 ntBASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 Z99714.1-201ENST00000450463 807 ntBASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 RPL21P131-201ENST00000497298 483 ntBASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 SNORA31.1-201ENST00000515993 133 ntBASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 SNORA31.5-201ENST00000516190 133 ntBASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 AC021269.2-201ENST00000532318 330 ntBASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 AC234778.2-201ENST00000566241 354 ntBASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 AC046143.2-201ENST00000609789 160 ntBASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 AC034102.8-201ENST00000615146 484 ntBASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 AP003485.2-201ENST00000623636 610 ntBASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 AC016717.2-201ENST00000609089 5141 ntBASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
RNF11Q9Y3C5 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.27□□□□□ -2.05
RNF11Q9Y3C5 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RNF11Q9Y3C5 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RNF11Q9Y3C5 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
RNF11Q9Y3C5 SNORD114-30-201ENST00000364448 72 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 268 ms