Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.86□□□□□ -1.79
SIX4Q9UIU6 AGGF1P4-201ENST00000568249 801 ntBASIC3.86□□□□□ -1.79
SIX4Q9UIU6 LARP7P2-201ENST00000575306 125 ntBASIC3.86□□□□□ -1.79
SIX4Q9UIU6 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.86□□□□□ -1.79
SIX4Q9UIU6 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.86□□□□□ -1.79
SIX4Q9UIU6 AC010591.1-201ENST00000603941 649 ntBASIC3.86□□□□□ -1.79
SIX4Q9UIU6 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.86□□□□□ -1.79
SIX4Q9UIU6 AC107214.2-201ENST00000608204 634 ntBASIC3.86□□□□□ -1.79
SIX4Q9UIU6 AL732372.2-225ENST00000642124 456 ntBASIC3.86□□□□□ -1.79
SIX4Q9UIU6 AC090337.1-201ENST00000579651 2074 ntBASIC3.86□□□□□ -1.79
SIX4Q9UIU6 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.86□□□□□ -1.79
SIX4Q9UIU6 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SIX4Q9UIU6 MTND4P16-201ENST00000466108 1367 ntBASIC3.86□□□□□ -1.79
SIX4Q9UIU6 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
SIX4Q9UIU6 AC006504.1-201ENST00000562493 3666 ntBASIC3.85□□□□□ -1.79
SIX4Q9UIU6 MAPK10-373ENST00000641983 6772 ntBASIC3.85□□□□□ -1.79
SIX4Q9UIU6 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 RNU6-283P-201ENST00000364788 107 ntBASIC3.85□□□□□ -1.79
SIX4Q9UIU6 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 OR5H15-201ENST00000383696 930 ntBASIC3.85□□□□□ -1.79
SIX4Q9UIU6 Y_RNA.505-201ENST00000384489 102 ntBASIC3.85□□□□□ -1.79
SIX4Q9UIU6 MIR200C-201ENST00000384980 68 ntBASIC3.85□□□□□ -1.79
SIX4Q9UIU6 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 ZYG11AP1-201ENST00000430329 837 ntBASIC3.85□□□□□ -1.79
SIX4Q9UIU6 SKP1P1-201ENST00000438081 489 ntBASIC3.85□□□□□ -1.79
SIX4Q9UIU6 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 MTCO3P2-201ENST00000457365 171 ntBASIC3.85□□□□□ -1.79
SIX4Q9UIU6 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 RNU6-956P-201ENST00000458868 103 ntBASIC3.85□□□□□ -1.79
SIX4Q9UIU6 snoU13.7-201ENST00000459220 104 ntBASIC3.85□□□□□ -1.79
SIX4Q9UIU6 AC097493.1-201ENST00000463958 372 ntBASIC3.85□□□□□ -1.79
SIX4Q9UIU6 AP000893.1-201ENST00000474462 794 ntBASIC3.85□□□□□ -1.79
SIX4Q9UIU6 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 AC005798.1-201ENST00000513715 387 ntBASIC3.85□□□□□ -1.79
SIX4Q9UIU6 MTCO2P32-201ENST00000514865 403 ntBASIC3.85□□□□□ -1.79
SIX4Q9UIU6 RNU6-150P-201ENST00000516237 95 ntBASIC3.85□□□□□ -1.79
SIX4Q9UIU6 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 AC136618.2-201ENST00000575091 400 ntBASIC3.85□□□□□ -1.79
SIX4Q9UIU6 MIR4504-201ENST00000577413 92 ntBASIC3.85□□□□□ -1.79
SIX4Q9UIU6 MIR3611-201ENST00000584484 83 ntBASIC3.85□□□□□ -1.79
SIX4Q9UIU6 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 AC128687.1-201ENST00000605304 619 ntBASIC3.85□□□□□ -1.79
SIX4Q9UIU6 HMGB1P50-201ENST00000605814 607 ntBASIC3.85□□□□□ -1.79
SIX4Q9UIU6 AP000254.1-201ENST00000609934 520 ntBASIC3.85□□□□□ -1.79
SIX4Q9UIU6 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 OR4G11P-202ENST00000642116 1414 ntBASIC3.85□□□□□ -1.79
SIX4Q9UIU6 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.85□□□□□ -1.79
SIX4Q9UIU6 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 AL079343.1-201ENST00000572358 1771 ntBASIC3.84□□□□□ -1.79
SIX4Q9UIU6 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 U3.15-201ENST00000365398 212 ntBASIC3.84□□□□□ -1.79
SIX4Q9UIU6 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 RNA5SP171-201ENST00000391071 115 ntBASIC3.84□□□□□ -1.79
SIX4Q9UIU6 AL121972.1-201ENST00000402023 252 ntBASIC3.84□□□□□ -1.79
SIX4Q9UIU6 ZNF603P-201ENST00000405613 487 ntBASIC3.84□□□□□ -1.79
SIX4Q9UIU6 RN7SKP177-201ENST00000410567 355 ntBASIC3.84□□□□□ -1.79
SIX4Q9UIU6 AC004022.2-201ENST00000413824 193 ntBASIC3.84□□□□□ -1.79
SIX4Q9UIU6 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 HMGN2P31-201ENST00000432430 273 ntBASIC3.84□□□□□ -1.79
SIX4Q9UIU6 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 AC105402.2-201ENST00000438503 358 ntBASIC3.84□□□□□ -1.79
SIX4Q9UIU6 AL512286.1-201ENST00000439244 400 ntBASIC3.84□□□□□ -1.79
SIX4Q9UIU6 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.84□□□□□ -1.79
SIX4Q9UIU6 SNRPGP5-201ENST00000456003 220 ntBASIC3.84□□□□□ -1.79
SIX4Q9UIU6 SNRPGP9-201ENST00000456025 225 ntBASIC3.84□□□□□ -1.79
SIX4Q9UIU6 RPS15AP17-201ENST00000470598 390 ntBASIC3.84□□□□□ -1.79
SIX4Q9UIU6 AC084357.1-201ENST00000473404 255 ntBASIC3.84□□□□□ -1.79
SIX4Q9UIU6 AC087879.1-201ENST00000474343 374 ntBASIC3.84□□□□□ -1.79
SIX4Q9UIU6 AC116337.2-201ENST00000477662 156 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms