Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC068722.2-201ENST00000618734 544 ntBASIC3.55□□□□□ -1.84
CTNNA3Q9UI47 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.55□□□□□ -1.84
CTNNA3Q9UI47 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CTNNA3Q9UI47 AC000403.1-201ENST00000613696 3585 ntBASIC3.55□□□□□ -1.84
CTNNA3Q9UI47 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.55□□□□□ -1.84
CTNNA3Q9UI47 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
CTNNA3Q9UI47 FTLP6-201ENST00000355274 422 ntBASIC3.54□□□□□ -1.84
CTNNA3Q9UI47 RNU6-989P-201ENST00000362756 107 ntBASIC3.54□□□□□ -1.84
CTNNA3Q9UI47 AL356057.1-202ENST00000402263 756 ntBASIC3.54□□□□□ -1.84
CTNNA3Q9UI47 BMS1P22-201ENST00000414726 313 ntBASIC3.54□□□□□ -1.84
CTNNA3Q9UI47 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.54□□□□□ -1.84
CTNNA3Q9UI47 MTATP6P4-201ENST00000427725 675 ntBASIC3.54□□□□□ -1.84
CTNNA3Q9UI47 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.54□□□□□ -1.84
CTNNA3Q9UI47 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.54□□□□□ -1.84
CTNNA3Q9UI47 AC104472.2-201ENST00000469035 601 ntBASIC3.54□□□□□ -1.84
CTNNA3Q9UI47 RPS17P11-201ENST00000474297 293 ntBASIC3.54□□□□□ -1.84
CTNNA3Q9UI47 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.54□□□□□ -1.84
CTNNA3Q9UI47 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.54□□□□□ -1.84
CTNNA3Q9UI47 AC007536.1-201ENST00000533382 349 ntBASIC3.54□□□□□ -1.84
CTNNA3Q9UI47 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.54□□□□□ -1.84
CTNNA3Q9UI47 MIR4672-201ENST00000583126 81 ntBASIC3.54□□□□□ -1.84
CTNNA3Q9UI47 AC040174.2-201ENST00000602701 465 ntBASIC3.54□□□□□ -1.84
CTNNA3Q9UI47 AC012119.1-201ENST00000603184 222 ntBASIC3.54□□□□□ -1.84
CTNNA3Q9UI47 AL627309.6-201ENST00000606857 840 ntBASIC3.54□□□□□ -1.84
CTNNA3Q9UI47 CYCSP41-201ENST00000616920 296 ntBASIC3.54□□□□□ -1.84
CTNNA3Q9UI47 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.54□□□□□ -1.84
CTNNA3Q9UI47 LRRC77P-213ENST00000637727 880 ntBASIC3.54□□□□□ -1.84
CTNNA3Q9UI47 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.54□□□□□ -1.84
CTNNA3Q9UI47 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CTNNA3Q9UI47 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CTNNA3Q9UI47 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.53□□□□□ -1.84
CTNNA3Q9UI47 RNU6-1005P-201ENST00000384519 107 ntBASIC3.53□□□□□ -1.84
CTNNA3Q9UI47 RNU6-851P-201ENST00000384565 107 ntBASIC3.53□□□□□ -1.84
CTNNA3Q9UI47 AL031121.1-201ENST00000406553 254 ntBASIC3.53□□□□□ -1.84
CTNNA3Q9UI47 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.53□□□□□ -1.84
CTNNA3Q9UI47 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.53□□□□□ -1.84
CTNNA3Q9UI47 MORF4L1P7-201ENST00000426038 703 ntBASIC3.53□□□□□ -1.84
CTNNA3Q9UI47 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.53□□□□□ -1.84
CTNNA3Q9UI47 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.53□□□□□ -1.84
CTNNA3Q9UI47 RSL24D1P8-201ENST00000434442 492 ntBASIC3.53□□□□□ -1.84
CTNNA3Q9UI47 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.53□□□□□ -1.84
CTNNA3Q9UI47 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.53□□□□□ -1.84
CTNNA3Q9UI47 AC010486.1-201ENST00000511793 424 ntBASIC3.53□□□□□ -1.84
CTNNA3Q9UI47 OR5G4P-201ENST00000525251 760 ntBASIC3.53□□□□□ -1.84
CTNNA3Q9UI47 AL731537.2-201ENST00000561565 951 ntBASIC3.53□□□□□ -1.84
CTNNA3Q9UI47 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CTNNA3Q9UI47 AC104984.5-201ENST00000586878 94 ntBASIC3.53□□□□□ -1.84
CTNNA3Q9UI47 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.53□□□□□ -1.84
CTNNA3Q9UI47 AC006116.7-201ENST00000590141 756 ntBASIC3.53□□□□□ -1.84
CTNNA3Q9UI47 AC078899.3-201ENST00000599065 212 ntBASIC3.53□□□□□ -1.84
CTNNA3Q9UI47 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.53□□□□□ -1.84
CTNNA3Q9UI47 AC021851.1-201ENST00000608537 1082 ntBASIC3.53□□□□□ -1.84
CTNNA3Q9UI47 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CTNNA3Q9UI47 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.53□□□□□ -1.84
CTNNA3Q9UI47 MTND2P41-201ENST00000637599 773 ntBASIC3.53□□□□□ -1.84
CTNNA3Q9UI47 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 MTND4P21-201ENST00000453886 1357 ntBASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 FAM35CP-201ENST00000554755 2470 ntBASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 MIR181B1-201ENST00000385240 110 ntBASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 AL139281.1-201ENST00000422120 335 ntBASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 UBE2D3P2-201ENST00000424409 445 ntBASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 YWHAZP7-201ENST00000436906 631 ntBASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 AC004022.1-201ENST00000447766 1066 ntBASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 AC112492.1-201ENST00000449607 712 ntBASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 RN7SL499P-201ENST00000481141 276 ntBASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 AC004217.3-201ENST00000551552 878 ntBASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 AC074051.3-201ENST00000570238 358 ntBASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 AC009220.3-201ENST00000604318 586 ntBASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 AL360181.4-201ENST00000621752 134 ntBASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 MIR6733-201ENST00000635723 61 ntBASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
CTNNA3Q9UI47 MTCO1P6-201ENST00000481192 1384 ntBASIC3.51□□□□□ -1.85
CTNNA3Q9UI47 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CTNNA3Q9UI47 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
CTNNA3Q9UI47 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CTNNA3Q9UI47 AL589826.1-201ENST00000340697 249 ntBASIC3.51□□□□□ -1.85
CTNNA3Q9UI47 RNA5SP126-201ENST00000365092 109 ntBASIC3.51□□□□□ -1.85
CTNNA3Q9UI47 SNORA9.2-201ENST00000365361 133 ntBASIC3.51□□□□□ -1.85
CTNNA3Q9UI47 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.51□□□□□ -1.85
CTNNA3Q9UI47 RNU6-821P-201ENST00000390995 107 ntBASIC3.51□□□□□ -1.85
CTNNA3Q9UI47 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CTNNA3Q9UI47 RPL7P8-201ENST00000411964 730 ntBASIC3.51□□□□□ -1.85
CTNNA3Q9UI47 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.51□□□□□ -1.85
CTNNA3Q9UI47 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.51□□□□□ -1.85
CTNNA3Q9UI47 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.51□□□□□ -1.85
CTNNA3Q9UI47 RPP40P1-201ENST00000426762 456 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms