Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC025881.1-201ENST00000518851 512 ntBASIC2.29□□□□□ -2.04
CCDC88CQ9P219 AP003102.1-201ENST00000525638 661 ntBASIC2.29□□□□□ -2.04
CCDC88CQ9P219 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC88CQ9P219 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.29□□□□□ -2.04
CCDC88CQ9P219 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC88CQ9P219 AC112503.1-201ENST00000608436 391 ntBASIC2.29□□□□□ -2.04
CCDC88CQ9P219 AC090617.7-201ENST00000623952 126 ntBASIC2.29□□□□□ -2.04
CCDC88CQ9P219 FAM157B-203ENST00000639350 358 ntBASIC2.29□□□□□ -2.04
CCDC88CQ9P219 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC88CQ9P219 MTND4P31-201ENST00000425607 1343 ntBASIC2.29□□□□□ -2.04
CCDC88CQ9P219 MTND4P34-201ENST00000572715 1371 ntBASIC2.29□□□□□ -2.04
CCDC88CQ9P219 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC88CQ9P219 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
CCDC88CQ9P219 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC88CQ9P219 RNU6-244P-201ENST00000391028 104 ntBASIC2.29□□□□□ -2.04
CCDC88CQ9P219 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC88CQ9P219 RNU4-26P-201ENST00000410270 107 ntBASIC2.29□□□□□ -2.04
CCDC88CQ9P219 OOSP1P1-201ENST00000423265 274 ntBASIC2.29□□□□□ -2.04
CCDC88CQ9P219 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC88CQ9P219 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC88CQ9P219 RN7SKP234-201ENST00000517173 224 ntBASIC2.29□□□□□ -2.04
CCDC88CQ9P219 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC88CQ9P219 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC88CQ9P219 AP002770.2-201ENST00000543613 532 ntBASIC2.29□□□□□ -2.04
CCDC88CQ9P219 AC128657.1-201ENST00000549459 145 ntBASIC2.29□□□□□ -2.04
CCDC88CQ9P219 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC88CQ9P219 CKS1BP1-201ENST00000555221 240 ntBASIC2.29□□□□□ -2.04
CCDC88CQ9P219 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC88CQ9P219 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.28□□□□□ -2.04
CCDC88CQ9P219 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC88CQ9P219 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC88CQ9P219 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.28□□□□□ -2.04
CCDC88CQ9P219 AL158825.1-201ENST00000414735 521 ntBASIC2.28□□□□□ -2.04
CCDC88CQ9P219 AC018634.1-201ENST00000437554 401 ntBASIC2.28□□□□□ -2.04
CCDC88CQ9P219 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC88CQ9P219 FAM103A2P-201ENST00000444122 354 ntBASIC2.28□□□□□ -2.04
CCDC88CQ9P219 RSL24D1P2-201ENST00000445584 366 ntBASIC2.28□□□□□ -2.04
CCDC88CQ9P219 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC2.28□□□□□ -2.04
CCDC88CQ9P219 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC88CQ9P219 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.28□□□□□ -2.04
CCDC88CQ9P219 AP003717.3-201ENST00000544832 1180 ntBASIC2.28□□□□□ -2.04
CCDC88CQ9P219 AL645944.1-201ENST00000603857 493 ntBASIC2.28□□□□□ -2.04
CCDC88CQ9P219 AC068313.1-201ENST00000604028 1008 ntBASIC2.28□□□□□ -2.04
CCDC88CQ9P219 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC88CQ9P219 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
CCDC88CQ9P219 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.28□□□□□ -2.05
CCDC88CQ9P219 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CCDC88CQ9P219 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.27□□□□□ -2.05
CCDC88CQ9P219 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CCDC88CQ9P219 RN7SKP284-201ENST00000411002 343 ntBASIC2.27□□□□□ -2.05
CCDC88CQ9P219 RN7SKP192-201ENST00000411291 327 ntBASIC2.27□□□□□ -2.05
CCDC88CQ9P219 RAP1BP1-201ENST00000412709 553 ntBASIC2.27□□□□□ -2.05
CCDC88CQ9P219 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CCDC88CQ9P219 RPL7P10-201ENST00000417407 739 ntBASIC2.27□□□□□ -2.05
CCDC88CQ9P219 ATG3P1-201ENST00000419507 911 ntBASIC2.27□□□□□ -2.05
CCDC88CQ9P219 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC88CQ9P219 AC003685.2-201ENST00000422795 395 ntBASIC2.27□□□□□ -2.05
CCDC88CQ9P219 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.27□□□□□ -2.05
CCDC88CQ9P219 AC104389.3-201ENST00000445629 235 ntBASIC2.27□□□□□ -2.05
CCDC88CQ9P219 AL353705.4-201ENST00000449661 238 ntBASIC2.27□□□□□ -2.05
CCDC88CQ9P219 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.27□□□□□ -2.05
CCDC88CQ9P219 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC88CQ9P219 OR4R2P-201ENST00000530815 597 ntBASIC2.27□□□□□ -2.05
CCDC88CQ9P219 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC88CQ9P219 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.27□□□□□ -2.05
CCDC88CQ9P219 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CCDC88CQ9P219 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.27□□□□□ -2.05
CCDC88CQ9P219 AC233263.6-201ENST00000631132 1963 ntBASIC2.27□□□□□ -2.05
CCDC88CQ9P219 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CCDC88CQ9P219 RN7SKP32-201ENST00000410167 303 ntBASIC2.27□□□□□ -2.05
CCDC88CQ9P219 MTND2P16-201ENST00000419987 799 ntBASIC2.27□□□□□ -2.05
CCDC88CQ9P219 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC88CQ9P219 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.27□□□□□ -2.05
CCDC88CQ9P219 RPL23AP20-201ENST00000447965 421 ntBASIC2.27□□□□□ -2.05
CCDC88CQ9P219 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.27□□□□□ -2.05
CCDC88CQ9P219 AC026412.2-201ENST00000512270 1075 ntBASIC2.27□□□□□ -2.05
CCDC88CQ9P219 RNU6-1004P-201ENST00000516584 111 ntBASIC2.27□□□□□ -2.05
CCDC88CQ9P219 AP000916.1-201ENST00000533869 835 ntBASIC2.27□□□□□ -2.05
CCDC88CQ9P219 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.27□□□□□ -2.05
CCDC88CQ9P219 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC88CQ9P219 EIF1AXP2-201ENST00000555940 413 ntBASIC2.27□□□□□ -2.05
CCDC88CQ9P219 AP001180.3-201ENST00000582221 145 ntBASIC2.27□□□□□ -2.05
CCDC88CQ9P219 AC115085.1-201ENST00000588924 229 ntBASIC2.27□□□□□ -2.05
CCDC88CQ9P219 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CCDC88CQ9P219 AL359757.2-201ENST00000624309 274 ntBASIC2.27□□□□□ -2.05
CCDC88CQ9P219 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CCDC88CQ9P219 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.26□□□□□ -2.05
CCDC88CQ9P219 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC88CQ9P219 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC88CQ9P219 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
CCDC88CQ9P219 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
CCDC88CQ9P219 TOMM20P4-201ENST00000427861 435 ntBASIC2.26□□□□□ -2.05
CCDC88CQ9P219 AL356320.1-201ENST00000429616 163 ntBASIC2.26□□□□□ -2.05
CCDC88CQ9P219 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC88CQ9P219 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC88CQ9P219 OR5H5P-201ENST00000503164 928 ntBASIC2.26□□□□□ -2.05
CCDC88CQ9P219 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC88CQ9P219 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.26□□□□□ -2.05
CCDC88CQ9P219 AC133963.2-201ENST00000513686 578 ntBASIC2.26□□□□□ -2.05
CCDC88CQ9P219 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms