Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
PHRF1Q9P1Y6 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.82□□□□□ -1.96
PHRF1Q9P1Y6 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.82□□□□□ -1.96
PHRF1Q9P1Y6 U6.98-201ENST00000637157 84 ntBASIC2.82□□□□□ -1.96
PHRF1Q9P1Y6 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PHRF1Q9P1Y6 AC010680.1-201ENST00000590024 3590 ntBASIC2.82□□□□□ -1.96
PHRF1Q9P1Y6 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PHRF1Q9P1Y6 Y_RNA.269-201ENST00000364685 89 ntBASIC2.81□□□□□ -1.96
PHRF1Q9P1Y6 RNU1-51P-201ENST00000365345 176 ntBASIC2.81□□□□□ -1.96
PHRF1Q9P1Y6 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PHRF1Q9P1Y6 AL450338.1-201ENST00000407987 512 ntBASIC2.81□□□□□ -1.96
PHRF1Q9P1Y6 MAGOH2P-202ENST00000584384 429 ntBASIC2.81□□□□□ -1.96
PHRF1Q9P1Y6 AC091834.1-201ENST00000614543 472 ntBASIC2.81□□□□□ -1.96
PHRF1Q9P1Y6 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.8□□□□□ -1.96
PHRF1Q9P1Y6 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
PHRF1Q9P1Y6 RNU6-178P-201ENST00000384631 104 ntBASIC2.8□□□□□ -1.96
PHRF1Q9P1Y6 AC073310.1-201ENST00000423226 1033 ntBASIC2.8□□□□□ -1.96
PHRF1Q9P1Y6 AL445646.1-201ENST00000431784 216 ntBASIC2.8□□□□□ -1.96
PHRF1Q9P1Y6 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.8□□□□□ -1.96
PHRF1Q9P1Y6 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.8□□□□□ -1.96
PHRF1Q9P1Y6 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.8□□□□□ -1.96
PHRF1Q9P1Y6 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC2.8□□□□□ -1.96
PHRF1Q9P1Y6 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.8□□□□□ -1.96
PHRF1Q9P1Y6 AC004486.1-201ENST00000546846 233 ntBASIC2.8□□□□□ -1.96
PHRF1Q9P1Y6 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.8□□□□□ -1.96
PHRF1Q9P1Y6 AC016542.2-201ENST00000624201 619 ntBASIC2.8□□□□□ -1.96
PHRF1Q9P1Y6 AL161431.1-201ENST00000618966 4205 ntBASIC2.8□□□□□ -1.96
PHRF1Q9P1Y6 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.8□□□□□ -1.96
PHRF1Q9P1Y6 MTND4P35-201ENST00000604257 1375 ntBASIC2.79□□□□□ -1.96
PHRF1Q9P1Y6 EI24P1-201ENST00000416584 867 ntBASIC2.79□□□□□ -1.96
PHRF1Q9P1Y6 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC2.79□□□□□ -1.96
PHRF1Q9P1Y6 AC106901.1-201ENST00000425086 698 ntBASIC2.79□□□□□ -1.96
PHRF1Q9P1Y6 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC2.79□□□□□ -1.96
PHRF1Q9P1Y6 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.79□□□□□ -1.96
PHRF1Q9P1Y6 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.79□□□□□ -1.96
PHRF1Q9P1Y6 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.79□□□□□ -1.96
PHRF1Q9P1Y6 AL645939.1-201ENST00000453429 797 ntBASIC2.79□□□□□ -1.96
PHRF1Q9P1Y6 RNU7-157P-201ENST00000459600 66 ntBASIC2.79□□□□□ -1.96
PHRF1Q9P1Y6 AP000926.1-201ENST00000479573 241 ntBASIC2.79□□□□□ -1.96
PHRF1Q9P1Y6 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.79□□□□□ -1.96
PHRF1Q9P1Y6 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC2.79□□□□□ -1.96
PHRF1Q9P1Y6 YWHAEP7-203ENST00000622054 312 ntBASIC2.79□□□□□ -1.96
PHRF1Q9P1Y6 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.79□□□□□ -1.96
PHRF1Q9P1Y6 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PHRF1Q9P1Y6 TRIAP1P1-201ENST00000427062 225 ntBASIC2.79□□□□□ -1.96
PHRF1Q9P1Y6 RPS27P5-201ENST00000444247 244 ntBASIC2.79□□□□□ -1.96
PHRF1Q9P1Y6 AC009961.3-201ENST00000449832 765 ntBASIC2.79□□□□□ -1.96
PHRF1Q9P1Y6 AC239798.3-201ENST00000454459 408 ntBASIC2.79□□□□□ -1.96
PHRF1Q9P1Y6 AC087385.1-201ENST00000475062 312 ntBASIC2.79□□□□□ -1.96
PHRF1Q9P1Y6 AC011611.5-201ENST00000552477 578 ntBASIC2.79□□□□□ -1.96
PHRF1Q9P1Y6 AC110588.1-201ENST00000559699 137 ntBASIC2.79□□□□□ -1.96
PHRF1Q9P1Y6 MIR5002-201ENST00000584713 97 ntBASIC2.79□□□□□ -1.96
PHRF1Q9P1Y6 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.79□□□□□ -1.96
PHRF1Q9P1Y6 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.79□□□□□ -1.96
PHRF1Q9P1Y6 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
PHRF1Q9P1Y6 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.78□□□□□ -1.96
PHRF1Q9P1Y6 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.78□□□□□ -1.96
PHRF1Q9P1Y6 ELOCP13-201ENST00000443934 329 ntBASIC2.78□□□□□ -1.96
PHRF1Q9P1Y6 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.78□□□□□ -1.96
PHRF1Q9P1Y6 AC008083.2-201ENST00000546707 476 ntBASIC2.78□□□□□ -1.96
PHRF1Q9P1Y6 AMZ2P1-203ENST00000565833 850 ntBASIC2.78□□□□□ -1.96
PHRF1Q9P1Y6 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.78□□□□□ -1.96
PHRF1Q9P1Y6 AC060766.3-201ENST00000591442 263 ntBASIC2.78□□□□□ -1.96
PHRF1Q9P1Y6 VN1R80P-201ENST00000597126 338 ntBASIC2.78□□□□□ -1.96
PHRF1Q9P1Y6 AC010297.1-201ENST00000623948 149 ntBASIC2.78□□□□□ -1.96
PHRF1Q9P1Y6 SNORA50A-202ENST00000629536 136 ntBASIC2.78□□□□□ -1.96
PHRF1Q9P1Y6 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
PHRF1Q9P1Y6 AL359715.4-201ENST00000606629 1436 ntBASIC2.77□□□□□ -1.97
PHRF1Q9P1Y6 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.77□□□□□ -1.97
PHRF1Q9P1Y6 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.77□□□□□ -1.97
PHRF1Q9P1Y6 MIR4255-201ENST00000579351 72 ntBASIC2.77□□□□□ -1.97
PHRF1Q9P1Y6 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.77□□□□□ -1.97
PHRF1Q9P1Y6 AC128687.1-201ENST00000605304 619 ntBASIC2.77□□□□□ -1.97
PHRF1Q9P1Y6 AL391813.2-201ENST00000609113 322 ntBASIC2.77□□□□□ -1.97
PHRF1Q9P1Y6 AL137847.3-201ENST00000611521 109 ntBASIC2.77□□□□□ -1.97
PHRF1Q9P1Y6 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.77□□□□□ -1.97
PHRF1Q9P1Y6 WWP1P1-201ENST00000466609 2769 ntBASIC2.77□□□□□ -1.97
PHRF1Q9P1Y6 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PHRF1Q9P1Y6 AC245100.2-201ENST00000454544 1679 ntBASIC2.77□□□□□ -1.97
PHRF1Q9P1Y6 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
PHRF1Q9P1Y6 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PHRF1Q9P1Y6 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PHRF1Q9P1Y6 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.76□□□□□ -1.97
PHRF1Q9P1Y6 RN7SKP226-201ENST00000364912 300 ntBASIC2.76□□□□□ -1.97
PHRF1Q9P1Y6 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PHRF1Q9P1Y6 Y_RNA.466-201ENST00000384294 113 ntBASIC2.76□□□□□ -1.97
PHRF1Q9P1Y6 MIR583-201ENST00000384846 75 ntBASIC2.76□□□□□ -1.97
PHRF1Q9P1Y6 LUZP4P1-201ENST00000415420 344 ntBASIC2.76□□□□□ -1.97
PHRF1Q9P1Y6 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC2.76□□□□□ -1.97
PHRF1Q9P1Y6 RAD23BP2-201ENST00000416003 1207 ntBASIC2.76□□□□□ -1.97
PHRF1Q9P1Y6 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.76□□□□□ -1.97
PHRF1Q9P1Y6 RPL21P2-201ENST00000440049 481 ntBASIC2.76□□□□□ -1.97
PHRF1Q9P1Y6 AC011753.1-201ENST00000451001 220 ntBASIC2.76□□□□□ -1.97
PHRF1Q9P1Y6 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.76□□□□□ -1.97
PHRF1Q9P1Y6 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PHRF1Q9P1Y6 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.76□□□□□ -1.97
PHRF1Q9P1Y6 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.76□□□□□ -1.97
PHRF1Q9P1Y6 AC120053.1-201ENST00000607706 736 ntBASIC2.76□□□□□ -1.97
PHRF1Q9P1Y6 MFSD8-245ENST00000641743 948 ntBASIC2.76□□□□□ -1.97
PHRF1Q9P1Y6 AP005901.5-201ENST00000545779 1796 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms