Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.36□□□□□ -1.87
NDE1Q9NXR1 MTND2P20-201ENST00000440805 661 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.36□□□□□ -1.87
NDE1Q9NXR1 RPS26P56-201ENST00000444468 240 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 AC008264.1-201ENST00000447612 367 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 NPM1P49-201ENST00000448027 714 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 PPIAP3-201ENST00000450588 505 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.36□□□□□ -1.87
NDE1Q9NXR1 RPL23AP35-201ENST00000451906 501 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 RPS27AP8-201ENST00000452665 445 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.36□□□□□ -1.87
NDE1Q9NXR1 MTCO3P2-201ENST00000457365 171 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.36□□□□□ -1.87
NDE1Q9NXR1 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.36□□□□□ -1.87
NDE1Q9NXR1 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.36□□□□□ -1.87
NDE1Q9NXR1 XKRY-201ENST00000510392 1100 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 MTCYBP43-201ENST00000513621 740 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 RN7SKP82-201ENST00000516786 223 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.36□□□□□ -1.87
NDE1Q9NXR1 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.36□□□□□ -1.87
NDE1Q9NXR1 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.36□□□□□ -1.87
NDE1Q9NXR1 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.36□□□□□ -1.87
NDE1Q9NXR1 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.36□□□□□ -1.87
NDE1Q9NXR1 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.36□□□□□ -1.87
NDE1Q9NXR1 YWHAQP7-201ENST00000603536 658 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 AP000811.1-201ENST00000603803 651 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 ARF4P1-201ENST00000605447 541 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 AC124312.4-201ENST00000605533 310 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 AC004223.4-201ENST00000612426 332 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 AC005344.1-201ENST00000613391 459 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 AL354976.1-201ENST00000613843 387 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 AC091931.1-201ENST00000623488 728 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
NDE1Q9NXR1 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.36□□□□□ -1.87
NDE1Q9NXR1 OR52H1-202ENST00000641796 1061 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 MTND5P28-201ENST00000438005 1594 ntBASIC3.36□□□□□ -1.87
NDE1Q9NXR1 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
NDE1Q9NXR1 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.36□□□□□ -1.87
NDE1Q9NXR1 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.36□□□□□ -1.87
NDE1Q9NXR1 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.36□□□□□ -1.87
NDE1Q9NXR1 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.35□□□□□ -1.87
NDE1Q9NXR1 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.35□□□□□ -1.87
NDE1Q9NXR1 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
NDE1Q9NXR1 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
NDE1Q9NXR1 RPL7P26-201ENST00000333817 754 ntBASIC3.35□□□□□ -1.87
NDE1Q9NXR1 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NDE1Q9NXR1 MIR506-201ENST00000384998 124 ntBASIC3.35□□□□□ -1.87
NDE1Q9NXR1 OR6C69P-201ENST00000394268 893 ntBASIC3.35□□□□□ -1.87
NDE1Q9NXR1 AC016769.3-201ENST00000396562 315 ntBASIC3.35□□□□□ -1.87
NDE1Q9NXR1 EIF5P1-201ENST00000400019 1231 ntBASIC3.35□□□□□ -1.87
NDE1Q9NXR1 CYCSP45-201ENST00000402289 315 ntBASIC3.35□□□□□ -1.87
NDE1Q9NXR1 AL023807.1-201ENST00000407932 359 ntBASIC3.35□□□□□ -1.87
NDE1Q9NXR1 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
NDE1Q9NXR1 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.35□□□□□ -1.87
NDE1Q9NXR1 AL356095.1-201ENST00000417217 199 ntBASIC3.35□□□□□ -1.87
NDE1Q9NXR1 AL592293.2-201ENST00000422292 996 ntBASIC3.35□□□□□ -1.87
NDE1Q9NXR1 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.35□□□□□ -1.87
NDE1Q9NXR1 MTND4P32-201ENST00000437189 1237 ntBASIC3.35□□□□□ -1.87
NDE1Q9NXR1 RPL39P6-201ENST00000448289 150 ntBASIC3.35□□□□□ -1.87
NDE1Q9NXR1 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.35□□□□□ -1.87
NDE1Q9NXR1 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.35□□□□□ -1.87
NDE1Q9NXR1 ARPC3P2-201ENST00000457786 533 ntBASIC3.35□□□□□ -1.87
NDE1Q9NXR1 RPS20P21-201ENST00000466859 343 ntBASIC3.35□□□□□ -1.87
NDE1Q9NXR1 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.35□□□□□ -1.87
NDE1Q9NXR1 SYPL1P1-201ENST00000473622 768 ntBASIC3.35□□□□□ -1.87
NDE1Q9NXR1 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
NDE1Q9NXR1 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.35□□□□□ -1.87
NDE1Q9NXR1 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.35□□□□□ -1.87
NDE1Q9NXR1 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.35□□□□□ -1.87
NDE1Q9NXR1 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
NDE1Q9NXR1 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.35□□□□□ -1.87
NDE1Q9NXR1 AC008127.2-201ENST00000549925 1075 ntBASIC3.35□□□□□ -1.87
NDE1Q9NXR1 AC011260.1-201ENST00000578420 472 ntBASIC3.35□□□□□ -1.87
NDE1Q9NXR1 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NDE1Q9NXR1 MIR5187-201ENST00000583479 76 ntBASIC3.35□□□□□ -1.87
NDE1Q9NXR1 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.35□□□□□ -1.87
NDE1Q9NXR1 OR2AS2P-201ENST00000606902 342 ntBASIC3.35□□□□□ -1.87
NDE1Q9NXR1 AC243773.3-201ENST00000613270 256 ntBASIC3.35□□□□□ -1.87
NDE1Q9NXR1 AC122133.1-201ENST00000613964 233 ntBASIC3.35□□□□□ -1.87
NDE1Q9NXR1 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.35□□□□□ -1.87
NDE1Q9NXR1 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.35□□□□□ -1.87
NDE1Q9NXR1 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.35□□□□□ -1.87
NDE1Q9NXR1 AC092192.1-201ENST00000633154 1018 ntBASIC3.35□□□□□ -1.87
NDE1Q9NXR1 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.35□□□□□ -1.87
NDE1Q9NXR1 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NDE1Q9NXR1 AC007256.1-201ENST00000392253 2765 ntBASIC3.35□□□□□ -1.87
NDE1Q9NXR1 AL513185.3-201ENST00000433335 1300 ntBASIC3.35□□□□□ -1.87
NDE1Q9NXR1 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NDE1Q9NXR1 AL390862.1-201ENST00000635467 1469 ntBASIC3.35□□□□□ -1.87
NDE1Q9NXR1 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AC118273.1-201ENST00000525324 3006 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AC068538.1-201ENST00000376856 336 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 RNU6-213P-201ENST00000384051 104 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 SNORD116-1-201ENST00000384335 95 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 RN7SKP53-201ENST00000411337 315 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AL356968.1-201ENST00000416622 474 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms