Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AC093534.1-201ENST00000504977 132 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 MLLT10P2-201ENST00000506434 249 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 AC111000.3-201ENST00000508057 576 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 AC116347.2-201ENST00000514912 523 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 AC103783.1-201ENST00000520506 373 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 AC060788.1-201ENST00000521318 469 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 HIGD1AP10-201ENST00000527837 282 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 GNRHR2P1-201ENST00000555315 631 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 AC060771.1-201ENST00000582031 164 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 SNORD84-203ENST00000584275 78 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 AC010620.1-201ENST00000601088 1102 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 AP001429.1-201ENST00000602568 530 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 AC104662.1-201ENST00000604448 511 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 AC004908.3-201ENST00000610248 625 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 AL355810.1-201ENST00000614629 552 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 MIR6780A-201ENST00000615089 68 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 AC012150.2-201ENST00000621300 544 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 AC009902.3-201ENST00000606235 2172 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 AC092125.1-201ENST00000562568 1995 ntBASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CHMP1AQ9HD42 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 AL158163.1-201ENST00000603915 1649 ntBASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 RNU6-1078P-201ENST00000364522 103 ntBASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 RPS3AP23-201ENST00000401762 784 ntBASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 RPS3AP24-201ENST00000407896 734 ntBASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 AC007390.1-201ENST00000415722 356 ntBASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 CCDC58P2-201ENST00000417131 366 ntBASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 UBE2V1P13-201ENST00000436983 439 ntBASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 AC010468.1-201ENST00000461022 817 ntBASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 DSTNP2-201ENST00000504533 515 ntBASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 BTF3L4P4-201ENST00000506381 449 ntBASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 RNU6-1231P-201ENST00000517185 103 ntBASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 AC105233.3-201ENST00000531125 744 ntBASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 AL356057.1-201ENST00000533798 831 ntBASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 AL121766.1-201ENST00000547436 487 ntBASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 CR383656.6-201ENST00000550518 394 ntBASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 AP001330.4-201ENST00000604350 154 ntBASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 AC105129.3-201ENST00000605455 485 ntBASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 OR2AS2P-201ENST00000606902 342 ntBASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 AL450472.3-201ENST00000615578 367 ntBASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 AC104010.1-201ENST00000616889 150 ntBASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 AC093591.3-201ENST00000634516 308 ntBASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 AL773545.4-201ENST00000637262 310 ntBASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 AL513478.4-201ENST00000641636 310 ntBASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 TAB3P1-202ENST00000452645 1634 ntBASIC3.48□□□□□ -1.85
CHMP1AQ9HD42 AC024560.2-201ENST00000507981 1497 ntBASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 AC009812.4-201ENST00000569134 1805 ntBASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 AC011460.1-201ENST00000636268 1834 ntBASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 RNU6-809P-201ENST00000384461 107 ntBASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 MIR129-1-201ENST00000384972 72 ntBASIC3.47□□□□□ -1.85
CHMP1AQ9HD42 AL136372.1-201ENST00000403060 228 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms