Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 RPS12P18-201ENST00000442381 270 ntBASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 ELOCP13-201ENST00000443934 329 ntBASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 U3.44-201ENST00000458938 192 ntBASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 NDUFA5P9-201ENST00000472609 340 ntBASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 AC020898.1-201ENST00000474167 787 ntBASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 RPL23AP55-201ENST00000498163 452 ntBASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 AC104090.1-201ENST00000506341 1171 ntBASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 AC006390.1-201ENST00000508068 283 ntBASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 RNU6-150P-201ENST00000516237 95 ntBASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 AC007536.1-201ENST00000533382 349 ntBASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 AC009097.3-201ENST00000563557 1018 ntBASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 MTATP6P24-201ENST00000576835 677 ntBASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 AC012119.1-201ENST00000603184 222 ntBASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 AC009220.3-201ENST00000604318 586 ntBASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 AC090425.2-201ENST00000608818 501 ntBASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 AC112484.5-201ENST00000624189 228 ntBASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 AC008993.2-201ENST00000631744 806 ntBASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 AC006927.4-201ENST00000639187 543 ntBASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.37□□□□□ -1.87
VIPAS39Q9H9C1 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 AC021755.1-201ENST00000559747 1447 ntBASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 RNU6-600P-201ENST00000362524 99 ntBASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 SNORA62-201ENST00000365493 153 ntBASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 RNU6-878P-201ENST00000384578 110 ntBASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 NIPA2P1-201ENST00000426223 976 ntBASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 RPL23AP74-201ENST00000437246 471 ntBASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 RPL7P5-201ENST00000471472 736 ntBASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 EEF1A1P37-201ENST00000522748 715 ntBASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 AC012669.1-201ENST00000603209 283 ntBASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 AC087683.2-201ENST00000611384 326 ntBASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 AP002782.1-201ENST00000623107 614 ntBASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.36□□□□□ -1.87
VIPAS39Q9H9C1 AL079305.1-201ENST00000623159 3008 ntBASIC3.35□□□□□ -1.87
VIPAS39Q9H9C1 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VIPAS39Q9H9C1 FAM133CP-201ENST00000332869 704 ntBASIC3.35□□□□□ -1.87
VIPAS39Q9H9C1 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
VIPAS39Q9H9C1 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
VIPAS39Q9H9C1 SNORD9-201ENST00000362566 104 ntBASIC3.35□□□□□ -1.87
VIPAS39Q9H9C1 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
VIPAS39Q9H9C1 RNU6-712P-201ENST00000410558 100 ntBASIC3.35□□□□□ -1.87
VIPAS39Q9H9C1 USP9YP33-201ENST00000412220 421 ntBASIC3.35□□□□□ -1.87
VIPAS39Q9H9C1 HIGD1AP15-201ENST00000416198 280 ntBASIC3.35□□□□□ -1.87
VIPAS39Q9H9C1 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.35□□□□□ -1.87
VIPAS39Q9H9C1 HMGB1P49-201ENST00000418882 569 ntBASIC3.35□□□□□ -1.87
VIPAS39Q9H9C1 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.35□□□□□ -1.87
VIPAS39Q9H9C1 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.35□□□□□ -1.87
VIPAS39Q9H9C1 AL390023.1-201ENST00000428836 262 ntBASIC3.35□□□□□ -1.87
VIPAS39Q9H9C1 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.35□□□□□ -1.87
VIPAS39Q9H9C1 AC016712.1-201ENST00000431088 378 ntBASIC3.35□□□□□ -1.87
VIPAS39Q9H9C1 USP9YP35-201ENST00000435696 412 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 159 ms