Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AL161713.1-201ENST00000555538 145 ntBASIC5.01□□□□□ -1.61
RNF38Q9H0F5 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.01□□□□□ -1.61
RNF38Q9H0F5 MIR4742-201ENST00000581069 85 ntBASIC5.01□□□□□ -1.61
RNF38Q9H0F5 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.01□□□□□ -1.61
RNF38Q9H0F5 RN7SL690P-201ENST00000582087 240 ntBASIC5.01□□□□□ -1.61
RNF38Q9H0F5 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF38Q9H0F5 AC068790.4-201ENST00000602474 263 ntBASIC5.01□□□□□ -1.61
RNF38Q9H0F5 AC113139.1-201ENST00000605049 239 ntBASIC5.01□□□□□ -1.61
RNF38Q9H0F5 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF38Q9H0F5 AC104237.2-201ENST00000612456 443 ntBASIC5.01□□□□□ -1.61
RNF38Q9H0F5 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.01□□□□□ -1.61
RNF38Q9H0F5 AL356585.4-201ENST00000623078 1229 ntBASIC5.01□□□□□ -1.61
RNF38Q9H0F5 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
RNF38Q9H0F5 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RNF38Q9H0F5 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.01□□□□□ -1.61
RNF38Q9H0F5 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
RNF38Q9H0F5 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF38Q9H0F5 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF38Q9H0F5 MTND4P35-201ENST00000604257 1375 ntBASIC5.01□□□□□ -1.61
RNF38Q9H0F5 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF38Q9H0F5 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF38Q9H0F5 TLK1P1-201ENST00000456760 2440 ntBASIC5.01□□□□□ -1.61
RNF38Q9H0F5 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF38Q9H0F5 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF38Q9H0F5 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
RNF38Q9H0F5 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5□□□□□ -1.61
RNF38Q9H0F5 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5□□□□□ -1.61
RNF38Q9H0F5 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5□□□□□ -1.61
RNF38Q9H0F5 RNU6-169P-201ENST00000365336 107 ntBASIC5□□□□□ -1.61
RNF38Q9H0F5 Y_RNA.474-201ENST00000384341 102 ntBASIC5□□□□□ -1.61
RNF38Q9H0F5 Y_RNA.579-201ENST00000390939 94 ntBASIC5□□□□□ -1.61
RNF38Q9H0F5 RNU6-510P-201ENST00000391239 108 ntBASIC5□□□□□ -1.61
RNF38Q9H0F5 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5□□□□□ -1.61
RNF38Q9H0F5 RGS17P1-201ENST00000423358 553 ntBASIC5□□□□□ -1.61
RNF38Q9H0F5 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC5□□□□□ -1.61
RNF38Q9H0F5 RPS17P8-201ENST00000434525 335 ntBASIC5□□□□□ -1.61
RNF38Q9H0F5 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5□□□□□ -1.61
RNF38Q9H0F5 RPL23AP74-201ENST00000437246 471 ntBASIC5□□□□□ -1.61
RNF38Q9H0F5 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5□□□□□ -1.61
RNF38Q9H0F5 CEACAMP6-201ENST00000452007 574 ntBASIC5□□□□□ -1.61
RNF38Q9H0F5 FGF7P3-201ENST00000454645 303 ntBASIC5□□□□□ -1.61
RNF38Q9H0F5 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5□□□□□ -1.61
RNF38Q9H0F5 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5□□□□□ -1.61
RNF38Q9H0F5 RPL37P6-202ENST00000464216 403 ntBASIC5□□□□□ -1.61
RNF38Q9H0F5 AL049874.2-201ENST00000492636 288 ntBASIC5□□□□□ -1.61
RNF38Q9H0F5 AC091868.1-201ENST00000508746 304 ntBASIC5□□□□□ -1.61
RNF38Q9H0F5 OR51K1P-201ENST00000510214 950 ntBASIC5□□□□□ -1.61
RNF38Q9H0F5 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5□□□□□ -1.61
RNF38Q9H0F5 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5□□□□□ -1.61
RNF38Q9H0F5 SNORD60.2-201ENST00000516883 86 ntBASIC5□□□□□ -1.61
RNF38Q9H0F5 SUB1P1-201ENST00000524415 382 ntBASIC5□□□□□ -1.61
RNF38Q9H0F5 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC5□□□□□ -1.61
RNF38Q9H0F5 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5□□□□□ -1.61
RNF38Q9H0F5 AC093249.4-201ENST00000564755 259 ntBASIC5□□□□□ -1.61
RNF38Q9H0F5 SNORA74C-1-201ENST00000580726 201 ntBASIC5□□□□□ -1.61
RNF38Q9H0F5 MIR6798-201ENST00000612887 67 ntBASIC5□□□□□ -1.61
RNF38Q9H0F5 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5□□□□□ -1.61
RNF38Q9H0F5 AC079684.1-201ENST00000621405 437 ntBASIC5□□□□□ -1.61
RNF38Q9H0F5 AC000123.2-201ENST00000623124 461 ntBASIC5□□□□□ -1.61
RNF38Q9H0F5 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5□□□□□ -1.61
RNF38Q9H0F5 MIR7641-1-201ENST00000627518 61 ntBASIC5□□□□□ -1.61
RNF38Q9H0F5 AC134503.1-201ENST00000633048 54 ntBASIC5□□□□□ -1.61
RNF38Q9H0F5 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
RNF38Q9H0F5 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5□□□□□ -1.61
RNF38Q9H0F5 Z95327.2-201ENST00000414579 1873 ntBASIC5□□□□□ -1.61
RNF38Q9H0F5 OR4G1P-203ENST00000641984 1631 ntBASIC5□□□□□ -1.61
RNF38Q9H0F5 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF38Q9H0F5 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF38Q9H0F5 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF38Q9H0F5 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RNF38Q9H0F5 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNF38Q9H0F5 AL049555.1-201ENST00000562834 1933 ntBASIC4.99□□□□□ -1.61
RNF38Q9H0F5 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RNF38Q9H0F5 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF38Q9H0F5 AC009643.2-201ENST00000603543 1448 ntBASIC4.99□□□□□ -1.61
RNF38Q9H0F5 AC105074.1-201ENST00000623380 3095 ntBASIC4.99□□□□□ -1.61
RNF38Q9H0F5 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF38Q9H0F5 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RNF38Q9H0F5 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RNF38Q9H0F5 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RNF38Q9H0F5 MIR369-201ENST00000362155 70 ntBASIC4.99□□□□□ -1.61
RNF38Q9H0F5 Y_RNA.144-201ENST00000363521 113 ntBASIC4.99□□□□□ -1.61
RNF38Q9H0F5 RNU4-1-201ENST00000363925 141 ntBASIC4.99□□□□□ -1.61
RNF38Q9H0F5 RNY4P16-201ENST00000364768 94 ntBASIC4.99□□□□□ -1.61
RNF38Q9H0F5 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RNF38Q9H0F5 RNA5SP332-201ENST00000391063 115 ntBASIC4.99□□□□□ -1.61
RNF38Q9H0F5 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF38Q9H0F5 AL049697.2-201ENST00000403708 294 ntBASIC4.99□□□□□ -1.61
RNF38Q9H0F5 RPS4XP9-201ENST00000405151 780 ntBASIC4.99□□□□□ -1.61
RNF38Q9H0F5 RPL31P2-201ENST00000413849 377 ntBASIC4.99□□□□□ -1.61
RNF38Q9H0F5 RPL36AP36-201ENST00000418616 301 ntBASIC4.99□□□□□ -1.61
RNF38Q9H0F5 RPS15AP12-201ENST00000419498 388 ntBASIC4.99□□□□□ -1.61
RNF38Q9H0F5 MTCYBP8-201ENST00000422855 651 ntBASIC4.99□□□□□ -1.61
RNF38Q9H0F5 AC006548.1-201ENST00000427470 102 ntBASIC4.99□□□□□ -1.61
RNF38Q9H0F5 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.99□□□□□ -1.61
RNF38Q9H0F5 HMGB1P18-201ENST00000438801 619 ntBASIC4.99□□□□□ -1.61
RNF38Q9H0F5 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF38Q9H0F5 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
RNF38Q9H0F5 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.99□□□□□ -1.61
RNF38Q9H0F5 SNORD19B-201ENST00000459623 84 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms