Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 AC068831.4-201ENST00000556118 109 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 CYCSP40-201ENST00000575927 294 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 AC010591.1-201ENST00000603941 649 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 SNORD91B-202ENST00000608459 222 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 MIR6820-201ENST00000611508 62 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 RMST_3.1-201ENST00000611651 109 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 AC093648.1-201ENST00000623546 606 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 AC138649.5-201ENST00000637456 137 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 AC000123.3-201ENST00000624029 4975 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 RNU6-335P-201ENST00000364563 113 ntBASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 SNORA23-201ENST00000365128 182 ntBASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 RNU6-1074P-201ENST00000383995 104 ntBASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 MIR105-1-201ENST00000385222 81 ntBASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 AP000580.1-201ENST00000404439 358 ntBASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 AC119751.6-201ENST00000416712 186 ntBASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 AL121601.2-201ENST00000438019 707 ntBASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 RN7SL441P-201ENST00000492388 296 ntBASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 RNA5SP401-201ENST00000515920 127 ntBASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 Y_RNA.702-201ENST00000516843 96 ntBASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 RNU6-1092P-201ENST00000516955 87 ntBASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 AF235103.2-201ENST00000525753 346 ntBASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 AP001922.4-201ENST00000526967 290 ntBASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 AC005868.1-201ENST00000536421 331 ntBASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 AC005730.3-201ENST00000583067 366 ntBASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 AF038458.1-201ENST00000588406 262 ntBASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 AC087283.1-201ENST00000604029 1074 ntBASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 AC012443.1-201ENST00000605605 231 ntBASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 AC015967.1-201ENST00000619893 476 ntBASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 FRG1KP-201ENST00000623592 341 ntBASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 AC024614.3-201ENST00000637860 256 ntBASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 AC074101.1-201ENST00000637861 241 ntBASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 AL391684.1-202ENST00000641293 1636 ntBASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 AP001273.1-201ENST00000624493 3152 ntBASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM55Q9BYV6 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 AC073343.1-201ENST00000328239 651 ntBASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 RNU6-188P-201ENST00000364207 107 ntBASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 RNA5SP90-201ENST00000364801 99 ntBASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 RNA5SP455-201ENST00000365190 119 ntBASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 RNU6-996P-201ENST00000365438 107 ntBASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 AL359634.1-202ENST00000404721 284 ntBASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 AL354719.1-201ENST00000406535 843 ntBASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 AL356776.1-201ENST00000406574 447 ntBASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 RNU6-1068P-201ENST00000410958 103 ntBASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 RPL7AP73-201ENST00000413490 353 ntBASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 SNRPFP1-201ENST00000414761 252 ntBASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 AC093655.2-201ENST00000425735 631 ntBASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 HMGB3P9-201ENST00000441799 583 ntBASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 GAPDHP27-201ENST00000447427 1020 ntBASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 AL359073.1-201ENST00000448036 403 ntBASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 RPS27AP17-201ENST00000463344 455 ntBASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 AC010631.1-201ENST00000474150 156 ntBASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 AC012158.1-204ENST00000483430 465 ntBASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 AC018710.1-201ENST00000506509 158 ntBASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 STMN1P2-201ENST00000508435 439 ntBASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 NAF1-205ENST00000509434 385 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 AC025465.4-201ENST00000513422 638 ntBASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 AF186190.1-201ENST00000517470 480 ntBASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 PHBP17-201ENST00000528576 541 ntBASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM55Q9BYV6 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms