Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC016712.1-201ENST00000431088 378 ntBASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 AC011998.1-201ENST00000433403 117 ntBASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 AL136380.1-201ENST00000447970 162 ntBASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 AL359385.1-201ENST00000456509 365 ntBASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 AC010469.1-201ENST00000463864 576 ntBASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 IFITM8P-201ENST00000522529 394 ntBASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 AC084783.1-201ENST00000565846 910 ntBASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 CYP4A43P-201ENST00000568156 121 ntBASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 MIR3118-1-201ENST00000581787 76 ntBASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 ELOCP28-201ENST00000590044 317 ntBASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 AL160290.3-201ENST00000604869 165 ntBASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 AC007684.1-201ENST00000609671 477 ntBASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 AC091953.2-201ENST00000623979 160 ntBASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 AC244517.1-201ENST00000606030 2086 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 AC005832.2-201ENST00000538921 1430 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 RNU6-1249P-201ENST00000363237 111 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 MIR659-201ENST00000384963 97 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 MIR181A1-201ENST00000385026 110 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 RNU11-4P-201ENST00000391149 133 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 RNA5SP104-201ENST00000410989 118 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 AC119751.6-201ENST00000416712 186 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 RPL7AP25-201ENST00000423357 805 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 AC019097.1-201ENST00000424783 735 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 FCF1P1-201ENST00000432690 571 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 AC069285.2-201ENST00000440210 275 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 RAC1P7-201ENST00000445367 377 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 RPS17P13-201ENST00000448974 407 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 PSPHP1-201ENST00000450062 261 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 AC234775.1-201ENST00000454247 670 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 UBDP1-202ENST00000457888 382 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 AC004924.1-201ENST00000480160 781 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 AC010587.1-201ENST00000505809 469 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 RN7SKP92-201ENST00000517266 244 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 TPRKBP2-201ENST00000565969 475 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 RPL23AP97-201ENST00000568955 471 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 MIR3146-201ENST00000580367 79 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 COX6CP3-201ENST00000580869 223 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 AC006254.3-201ENST00000603353 884 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 MIR98-201ENST00000606724 119 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 AC004908.2-201ENST00000609090 574 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 TUG1_1.1-201ENST00000610654 145 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 AL158196.1-201ENST00000616786 434 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 AC009268.2-201ENST00000621925 457 ntBASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM54Q9BYV2 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 AC012020.1-201ENST00000624541 1728 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 AL356489.2-201ENST00000566968 3528 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 OR4G2P-201ENST00000328113 903 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 RHOT1P2-201ENST00000366423 333 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 MIR93-201ENST00000385024 80 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 SNRPFP1-201ENST00000414761 252 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 AL590139.1-201ENST00000416267 400 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 CCDC58P2-201ENST00000417131 366 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 RPS15AP12-201ENST00000419498 388 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 AC133104.1-201ENST00000429100 218 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms