Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 AL645568.3-201ENST00000433683 316 ntBASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 RPL23AP60-201ENST00000450011 454 ntBASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 RPL23AP15-201ENST00000450202 459 ntBASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 HMGB1P4-201ENST00000455362 567 ntBASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 RPL36AP13-201ENST00000457490 317 ntBASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 AC021382.1-201ENST00000483523 359 ntBASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 RPS27P26-201ENST00000494583 239 ntBASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 Y_RNA.662-201ENST00000516028 97 ntBASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 CYCSP29-201ENST00000533731 318 ntBASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 AL121576.1-201ENST00000556055 276 ntBASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 AC009570.1-201ENST00000609599 745 ntBASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 AC123768.4-201ENST00000616244 701 ntBASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 AC007114.2-201ENST00000576014 4281 ntBASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 AC073365.1-203ENST00000641055 1992 ntBASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 Y_RNA.48-201ENST00000362710 103 ntBASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 RNU6-188P-201ENST00000364207 107 ntBASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 RNU5E-6P-201ENST00000365574 115 ntBASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 RNU6-317P-201ENST00000384031 107 ntBASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 MIR199B-201ENST00000384849 110 ntBASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 RPL7P23-201ENST00000493874 747 ntBASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 SNORA72.7-201ENST00000516349 94 ntBASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 Y_RNA.713-201ENST00000517013 96 ntBASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 AC022884.3-201ENST00000579571 248 ntBASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 COX6CP3-201ENST00000580869 223 ntBASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 AL078605.1-201ENST00000603529 500 ntBASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 MIR6716-201ENST00000613413 80 ntBASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 AL365222.1-201ENST00000614661 98 ntBASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 ZNF33CP-201ENST00000432492 2030 ntBASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL25A1Q9BXS0 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 AC139713.2-214ENST00000642059 1811 ntBASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 OLMALINC-203ENST00000641087 3779 ntBASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 RNA5SP211-201ENST00000365516 117 ntBASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 RNU6-47P-201ENST00000383866 107 ntBASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 Y_RNA.398-201ENST00000383952 99 ntBASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 Y_RNA.418-201ENST00000384029 102 ntBASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 RNU6-214P-201ENST00000384130 107 ntBASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 MIR517A-201ENST00000385001 87 ntBASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 MIR551A-201ENST00000385042 96 ntBASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 MIR640-201ENST00000385086 96 ntBASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 RNU6-278P-201ENST00000390945 109 ntBASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 BMS1P22-201ENST00000414726 313 ntBASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 AL035461.1-201ENST00000421490 332 ntBASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 RPS27AP12-201ENST00000429552 465 ntBASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 AL590233.1-201ENST00000430017 456 ntBASIC5.67□□□□□ -1.5
COL25A1Q9BXS0 RPS26P40-201ENST00000435209 294 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms