Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 OR5H2-201ENST00000355273 945 ntBASIC2.15□□□□□ -2.07
UPK3BQ9BT76 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
UPK3BQ9BT76 MIR422A-201ENST00000362286 90 ntBASIC2.15□□□□□ -2.07
UPK3BQ9BT76 SNORA48.5-201ENST00000391143 135 ntBASIC2.15□□□□□ -2.07
UPK3BQ9BT76 MTND3P20-201ENST00000407663 186 ntBASIC2.15□□□□□ -2.07
UPK3BQ9BT76 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.15□□□□□ -2.07
UPK3BQ9BT76 Z92545.1-201ENST00000411782 234 ntBASIC2.15□□□□□ -2.07
UPK3BQ9BT76 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.15□□□□□ -2.07
UPK3BQ9BT76 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.15□□□□□ -2.07
UPK3BQ9BT76 AC099677.1-201ENST00000420575 175 ntBASIC2.15□□□□□ -2.07
UPK3BQ9BT76 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.15□□□□□ -2.07
UPK3BQ9BT76 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.15□□□□□ -2.07
UPK3BQ9BT76 RSL24D1P3-201ENST00000449255 495 ntBASIC2.15□□□□□ -2.07
UPK3BQ9BT76 MTND2P3-201ENST00000452458 470 ntBASIC2.15□□□□□ -2.07
UPK3BQ9BT76 GSTA11P-201ENST00000452866 669 ntBASIC2.15□□□□□ -2.07
UPK3BQ9BT76 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.15□□□□□ -2.07
UPK3BQ9BT76 NAP1L1P3-201ENST00000462291 880 ntBASIC2.15□□□□□ -2.07
UPK3BQ9BT76 RPS4XP6-201ENST00000477670 797 ntBASIC2.15□□□□□ -2.07
UPK3BQ9BT76 AC015908.1-201ENST00000478739 476 ntBASIC2.15□□□□□ -2.07
UPK3BQ9BT76 RPL21P47-201ENST00000483696 477 ntBASIC2.15□□□□□ -2.07
UPK3BQ9BT76 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
UPK3BQ9BT76 PRELID3BP4-201ENST00000515476 571 ntBASIC2.15□□□□□ -2.07
UPK3BQ9BT76 RNU1-143P-201ENST00000516296 146 ntBASIC2.15□□□□□ -2.07
UPK3BQ9BT76 ZNF705CP-201ENST00000530515 889 ntBASIC2.15□□□□□ -2.07
UPK3BQ9BT76 OR4P1P-201ENST00000530808 1136 ntBASIC2.15□□□□□ -2.07
UPK3BQ9BT76 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.15□□□□□ -2.07
UPK3BQ9BT76 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.15□□□□□ -2.07
UPK3BQ9BT76 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.15□□□□□ -2.07
UPK3BQ9BT76 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.15□□□□□ -2.07
UPK3BQ9BT76 SNORD39.3-201ENST00000584451 71 ntBASIC2.15□□□□□ -2.07
UPK3BQ9BT76 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.15□□□□□ -2.07
UPK3BQ9BT76 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.15□□□□□ -2.07
UPK3BQ9BT76 AC012119.1-201ENST00000603184 222 ntBASIC2.15□□□□□ -2.07
UPK3BQ9BT76 RPL23AP88-201ENST00000605759 454 ntBASIC2.15□□□□□ -2.07
UPK3BQ9BT76 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.15□□□□□ -2.07
UPK3BQ9BT76 U1.23-201ENST00000610293 146 ntBASIC2.15□□□□□ -2.07
UPK3BQ9BT76 AC107871.2-201ENST00000612894 502 ntBASIC2.15□□□□□ -2.07
UPK3BQ9BT76 RNU1-68P-201ENST00000615382 146 ntBASIC2.15□□□□□ -2.07
UPK3BQ9BT76 U1.39-201ENST00000621562 146 ntBASIC2.15□□□□□ -2.07
UPK3BQ9BT76 AC040168.1-201ENST00000623594 991 ntBASIC2.15□□□□□ -2.07
UPK3BQ9BT76 AC026422.1-201ENST00000623961 452 ntBASIC2.15□□□□□ -2.07
UPK3BQ9BT76 AC139713.2-210ENST00000641741 992 ntBASIC2.15□□□□□ -2.07
UPK3BQ9BT76 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
UPK3BQ9BT76 SGO1P1-201ENST00000603525 1447 ntBASIC2.15□□□□□ -2.07
UPK3BQ9BT76 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
UPK3BQ9BT76 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.15□□□□□ -2.07
UPK3BQ9BT76 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
UPK3BQ9BT76 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
UPK3BQ9BT76 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.14□□□□□ -2.07
UPK3BQ9BT76 SNORD82-201ENST00000365530 70 ntBASIC2.14□□□□□ -2.07
UPK3BQ9BT76 NPM1P10-201ENST00000398310 865 ntBASIC2.14□□□□□ -2.07
UPK3BQ9BT76 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.14□□□□□ -2.07
UPK3BQ9BT76 RPL19P1-201ENST00000411635 428 ntBASIC2.14□□□□□ -2.07
UPK3BQ9BT76 AL133384.1-201ENST00000412744 351 ntBASIC2.14□□□□□ -2.07
UPK3BQ9BT76 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.14□□□□□ -2.07
UPK3BQ9BT76 AC091390.3-201ENST00000426478 338 ntBASIC2.14□□□□□ -2.07
UPK3BQ9BT76 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.14□□□□□ -2.07
UPK3BQ9BT76 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.14□□□□□ -2.07
UPK3BQ9BT76 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.14□□□□□ -2.07
UPK3BQ9BT76 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.14□□□□□ -2.07
UPK3BQ9BT76 RPL23AP16-201ENST00000441715 421 ntBASIC2.14□□□□□ -2.07
UPK3BQ9BT76 MTCO3P2-201ENST00000457365 171 ntBASIC2.14□□□□□ -2.07
UPK3BQ9BT76 RNA5SP310-201ENST00000459084 116 ntBASIC2.14□□□□□ -2.07
UPK3BQ9BT76 S100A11P2-201ENST00000467589 312 ntBASIC2.14□□□□□ -2.07
UPK3BQ9BT76 AP001025.2-201ENST00000490908 477 ntBASIC2.14□□□□□ -2.07
UPK3BQ9BT76 MTND3P24-201ENST00000506306 329 ntBASIC2.14□□□□□ -2.07
UPK3BQ9BT76 AC111000.2-201ENST00000507775 550 ntBASIC2.14□□□□□ -2.07
UPK3BQ9BT76 RNA5SP217-201ENST00000515959 91 ntBASIC2.14□□□□□ -2.07
UPK3BQ9BT76 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.14□□□□□ -2.07
UPK3BQ9BT76 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.14□□□□□ -2.07
UPK3BQ9BT76 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.14□□□□□ -2.07
UPK3BQ9BT76 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.14□□□□□ -2.07
UPK3BQ9BT76 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.14□□□□□ -2.07
UPK3BQ9BT76 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
UPK3BQ9BT76 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.14□□□□□ -2.07
UPK3BQ9BT76 AC090666.1-201ENST00000578241 445 ntBASIC2.14□□□□□ -2.07
UPK3BQ9BT76 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.14□□□□□ -2.07
UPK3BQ9BT76 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.14□□□□□ -2.07
UPK3BQ9BT76 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.14□□□□□ -2.07
UPK3BQ9BT76 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.14□□□□□ -2.07
UPK3BQ9BT76 GAS5-AS1-201ENST00000602767 694 ntBASIC2.14□□□□□ -2.07
UPK3BQ9BT76 AC106791.2-201ENST00000604680 391 ntBASIC2.14□□□□□ -2.07
UPK3BQ9BT76 AC055876.5-201ENST00000605667 259 ntBASIC2.14□□□□□ -2.07
UPK3BQ9BT76 AC012467.1-201ENST00000607740 256 ntBASIC2.14□□□□□ -2.07
UPK3BQ9BT76 AC093732.2-201ENST00000607950 274 ntBASIC2.14□□□□□ -2.07
UPK3BQ9BT76 AC106028.5-201ENST00000610332 395 ntBASIC2.14□□□□□ -2.07
UPK3BQ9BT76 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
UPK3BQ9BT76 AL162274.2-201ENST00000614406 332 ntBASIC2.14□□□□□ -2.07
UPK3BQ9BT76 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.14□□□□□ -2.07
UPK3BQ9BT76 AC091903.1-201ENST00000624322 454 ntBASIC2.14□□□□□ -2.07
UPK3BQ9BT76 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.14□□□□□ -2.07
UPK3BQ9BT76 ZNF663P-202ENST00000641770 1131 ntBASIC2.14□□□□□ -2.07
UPK3BQ9BT76 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.14□□□□□ -2.07
UPK3BQ9BT76 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.14□□□□□ -2.07
UPK3BQ9BT76 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.14□□□□□ -2.07
UPK3BQ9BT76 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.14□□□□□ -2.07
UPK3BQ9BT76 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
UPK3BQ9BT76 CUL1P1-201ENST00000509510 2425 ntBASIC2.13□□□□□ -2.07
UPK3BQ9BT76 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
UPK3BQ9BT76 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms