Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AC055876.1-202ENST00000567053 138 ntBASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 MIR4307-201ENST00000582802 84 ntBASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 TPMTP1-201ENST00000592307 737 ntBASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 BCRP9-201ENST00000605312 388 ntBASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 AC004067.1-201ENST00000608733 700 ntBASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 MIR7844-201ENST00000616161 122 ntBASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 MIR8059-201ENST00000620427 81 ntBASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 MIR4275-201ENST00000636486 87 ntBASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 LARP1BP1-201ENST00000506036 1359 ntBASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HERPUD2Q9BSE4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 RNU6-76P-201ENST00000384060 104 ntBASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 AL031577.2-201ENST00000404133 280 ntBASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 HMGN1P24-201ENST00000412282 298 ntBASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 AC004975.1-201ENST00000428733 208 ntBASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 MTND1P26-201ENST00000440488 538 ntBASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 ZNF114P1-201ENST00000453500 292 ntBASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 RPL23AP62-201ENST00000463396 453 ntBASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 RPL7P19-201ENST00000469948 618 ntBASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 RPL7P24-201ENST00000493052 752 ntBASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 AL359273.1-201ENST00000510918 627 ntBASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 RMST_9.1-201ENST00000619945 193 ntBASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 MAPK10-372ENST00000641954 3413 ntBASIC4.2□□□□□ -1.74
HERPUD2Q9BSE4 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 DDX10P1-201ENST00000448545 1933 ntBASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 RNU5A-1-201ENST00000362698 116 ntBASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 RNU6-432P-201ENST00000384196 109 ntBASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 AL356967.1-201ENST00000406305 431 ntBASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 AL389915.1-201ENST00000422463 466 ntBASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 RPL27AP8-201ENST00000424277 446 ntBASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 MED14P1-201ENST00000430517 648 ntBASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 RPL23AP46-201ENST00000438548 490 ntBASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 AL512286.1-201ENST00000439244 400 ntBASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 MTND1P30-201ENST00000441241 901 ntBASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 RPS4XP4-201ENST00000443195 763 ntBASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 AC114755.5-201ENST00000447760 831 ntBASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 UBE2CP3-201ENST00000502715 450 ntBASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 AC112198.1-201ENST00000505369 1220 ntBASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 ARL2BPP6-201ENST00000512757 439 ntBASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 MIR2116-201ENST00000517221 80 ntBASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 MTND2P38-201ENST00000522536 667 ntBASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 AC007834.2-201ENST00000536310 343 ntBASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 AL133271.1-201ENST00000538229 291 ntBASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 OSBPL9P5-201ENST00000542581 171 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms