Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 snoU13.22-201ENST00000459428 104 ntBASIC2.75□□□□□ -1.97
VAT1Q99536 RPS26P21-201ENST00000475397 348 ntBASIC2.75□□□□□ -1.97
VAT1Q99536 AC090525.1-201ENST00000479116 478 ntBASIC2.75□□□□□ -1.97
VAT1Q99536 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.75□□□□□ -1.97
VAT1Q99536 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.75□□□□□ -1.97
VAT1Q99536 AC239860.2-201ENST00000525886 270 ntBASIC2.75□□□□□ -1.97
VAT1Q99536 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.75□□□□□ -1.97
VAT1Q99536 CYCSP39-201ENST00000565821 309 ntBASIC2.75□□□□□ -1.97
VAT1Q99536 MTCO3P13-201ENST00000577757 781 ntBASIC2.75□□□□□ -1.97
VAT1Q99536 AC022069.1-201ENST00000582910 658 ntBASIC2.75□□□□□ -1.97
VAT1Q99536 AC092474.3-201ENST00000603022 568 ntBASIC2.75□□□□□ -1.97
VAT1Q99536 DPRXP5-201ENST00000604662 539 ntBASIC2.75□□□□□ -1.97
VAT1Q99536 AC002076.2-201ENST00000617362 122 ntBASIC2.75□□□□□ -1.97
VAT1Q99536 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.75□□□□□ -1.97
VAT1Q99536 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.75□□□□□ -1.97
VAT1Q99536 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VAT1Q99536 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
VAT1Q99536 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.74□□□□□ -1.97
VAT1Q99536 RNVU1-3-201ENST00000364313 161 ntBASIC2.74□□□□□ -1.97
VAT1Q99536 SNORA9-201ENST00000384215 133 ntBASIC2.74□□□□□ -1.97
VAT1Q99536 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.74□□□□□ -1.97
VAT1Q99536 RNU6-77P-201ENST00000410554 91 ntBASIC2.74□□□□□ -1.97
VAT1Q99536 UBE2D3P2-201ENST00000424409 445 ntBASIC2.74□□□□□ -1.97
VAT1Q99536 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.74□□□□□ -1.97
VAT1Q99536 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.74□□□□□ -1.97
VAT1Q99536 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.74□□□□□ -1.97
VAT1Q99536 AC107083.1-201ENST00000439643 279 ntBASIC2.74□□□□□ -1.97
VAT1Q99536 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.74□□□□□ -1.97
VAT1Q99536 MRPL50P4-201ENST00000446432 475 ntBASIC2.74□□□□□ -1.97
VAT1Q99536 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.74□□□□□ -1.97
VAT1Q99536 RN7SL499P-201ENST00000481141 276 ntBASIC2.74□□□□□ -1.97
VAT1Q99536 AC080014.1-201ENST00000496877 1201 ntBASIC2.74□□□□□ -1.97
VAT1Q99536 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VAT1Q99536 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.74□□□□□ -1.97
VAT1Q99536 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VAT1Q99536 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.74□□□□□ -1.97
VAT1Q99536 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VAT1Q99536 OR8K4P-201ENST00000534608 872 ntBASIC2.74□□□□□ -1.97
VAT1Q99536 AC095057.3-201ENST00000567102 1157 ntBASIC2.74□□□□□ -1.97
VAT1Q99536 AP001029.3-201ENST00000588063 596 ntBASIC2.74□□□□□ -1.97
VAT1Q99536 AC018755.4-201ENST00000619715 454 ntBASIC2.74□□□□□ -1.97
VAT1Q99536 AC092650.2-201ENST00000619984 902 ntBASIC2.74□□□□□ -1.97
VAT1Q99536 AC097372.4-201ENST00000625025 466 ntBASIC2.74□□□□□ -1.97
VAT1Q99536 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.74□□□□□ -1.97
VAT1Q99536 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
VAT1Q99536 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.74□□□□□ -1.97
VAT1Q99536 AC109315.1-201ENST00000584143 1347 ntBASIC2.73□□□□□ -1.97
VAT1Q99536 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.73□□□□□ -1.97
VAT1Q99536 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
VAT1Q99536 OR5T3-201ENST00000303059 1023 ntBASIC2.73□□□□□ -1.97
VAT1Q99536 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
VAT1Q99536 MIR525-201ENST00000384978 85 ntBASIC2.73□□□□□ -1.97
VAT1Q99536 MTND4LP20-201ENST00000402379 270 ntBASIC2.73□□□□□ -1.97
VAT1Q99536 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
VAT1Q99536 MTCO3P12-201ENST00000416718 547 ntBASIC2.73□□□□□ -1.97
VAT1Q99536 RPL7P10-201ENST00000417407 739 ntBASIC2.73□□□□□ -1.97
VAT1Q99536 AL513175.2-201ENST00000422071 443 ntBASIC2.73□□□□□ -1.97
VAT1Q99536 ZFAND6P1-201ENST00000434138 605 ntBASIC2.73□□□□□ -1.97
VAT1Q99536 AC104073.1-201ENST00000451988 151 ntBASIC2.73□□□□□ -1.97
VAT1Q99536 HMGN3P1-201ENST00000453847 193 ntBASIC2.73□□□□□ -1.97
VAT1Q99536 RPL9P33-201ENST00000484311 566 ntBASIC2.73□□□□□ -1.97
VAT1Q99536 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.73□□□□□ -1.97
VAT1Q99536 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.73□□□□□ -1.97
VAT1Q99536 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
VAT1Q99536 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.73□□□□□ -1.97
VAT1Q99536 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.73□□□□□ -1.97
VAT1Q99536 ELOCP29-201ENST00000588193 334 ntBASIC2.73□□□□□ -1.97
VAT1Q99536 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC2.73□□□□□ -1.97
VAT1Q99536 AC128687.1-201ENST00000605304 619 ntBASIC2.73□□□□□ -1.97
VAT1Q99536 AC112503.2-201ENST00000609005 552 ntBASIC2.73□□□□□ -1.97
VAT1Q99536 VIS1.1-201ENST00000610517 203 ntBASIC2.73□□□□□ -1.97
VAT1Q99536 AC104307.1-201ENST00000616142 196 ntBASIC2.73□□□□□ -1.97
VAT1Q99536 AC231759.1-201ENST00000616455 597 ntBASIC2.73□□□□□ -1.97
VAT1Q99536 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.73□□□□□ -1.97
VAT1Q99536 AC090617.7-201ENST00000623952 126 ntBASIC2.73□□□□□ -1.97
VAT1Q99536 LRRC77P-213ENST00000637727 880 ntBASIC2.73□□□□□ -1.97
VAT1Q99536 MAPK10-322ENST00000641485 4530 ntBASIC2.73□□□□□ -1.97
VAT1Q99536 ZNF807-201ENST00000328088 1707 ntBASIC2.73□□□□□ -1.97
VAT1Q99536 MTCO1P6-201ENST00000481192 1384 ntBASIC2.73□□□□□ -1.97
VAT1Q99536 MFSD8-213ENST00000641134 1327 ntBASIC2.72□□□□□ -1.97
VAT1Q99536 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.72□□□□□ -1.97
VAT1Q99536 RNU1-112P-201ENST00000364401 164 ntBASIC2.72□□□□□ -1.97
VAT1Q99536 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.72□□□□□ -1.97
VAT1Q99536 RNU6-921P-201ENST00000384361 107 ntBASIC2.72□□□□□ -1.97
VAT1Q99536 MIR649-201ENST00000384843 97 ntBASIC2.72□□□□□ -1.97
VAT1Q99536 RNU1-101P-201ENST00000391171 127 ntBASIC2.72□□□□□ -1.97
VAT1Q99536 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.72□□□□□ -1.97
VAT1Q99536 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VAT1Q99536 AL009174.1-201ENST00000426577 416 ntBASIC2.72□□□□□ -1.97
VAT1Q99536 AC092170.1-201ENST00000440211 356 ntBASIC2.72□□□□□ -1.97
VAT1Q99536 ST13P20-201ENST00000447996 1065 ntBASIC2.72□□□□□ -1.97
VAT1Q99536 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.72□□□□□ -1.97
VAT1Q99536 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.72□□□□□ -1.97
VAT1Q99536 RPS23P3-201ENST00000470993 430 ntBASIC2.72□□□□□ -1.97
VAT1Q99536 AL136126.1-201ENST00000473603 402 ntBASIC2.72□□□□□ -1.97
VAT1Q99536 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.72□□□□□ -1.97
VAT1Q99536 AC126182.1-201ENST00000478134 357 ntBASIC2.72□□□□□ -1.97
VAT1Q99536 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.72□□□□□ -1.97
VAT1Q99536 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.72□□□□□ -1.97
VAT1Q99536 AC105914.1-201ENST00000511798 226 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms