Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 Y_RNA.540-201ENST00000384638 111 ntBASIC3.47□□□□□ -1.85
IFT140Q96RY7 NDUFB4P5-201ENST00000415445 361 ntBASIC3.47□□□□□ -1.85
IFT140Q96RY7 RPL23AP76-201ENST00000441860 458 ntBASIC3.47□□□□□ -1.85
IFT140Q96RY7 SNRPGP9-201ENST00000456025 225 ntBASIC3.47□□□□□ -1.85
IFT140Q96RY7 RPL9P33-201ENST00000484311 566 ntBASIC3.47□□□□□ -1.85
IFT140Q96RY7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC3.47□□□□□ -1.85
IFT140Q96RY7 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.47□□□□□ -1.85
IFT140Q96RY7 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
IFT140Q96RY7 MTND4P35-201ENST00000604257 1375 ntBASIC3.47□□□□□ -1.85
IFT140Q96RY7 OR5H15-201ENST00000383696 930 ntBASIC3.47□□□□□ -1.85
IFT140Q96RY7 BTF3P4-201ENST00000418852 495 ntBASIC3.47□□□□□ -1.85
IFT140Q96RY7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.47□□□□□ -1.85
IFT140Q96RY7 RNU6-964P-201ENST00000516524 69 ntBASIC3.47□□□□□ -1.85
IFT140Q96RY7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
IFT140Q96RY7 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
IFT140Q96RY7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
IFT140Q96RY7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
IFT140Q96RY7 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
IFT140Q96RY7 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.46□□□□□ -1.86
IFT140Q96RY7 AC004263.1-201ENST00000479327 332 ntBASIC3.46□□□□□ -1.86
IFT140Q96RY7 HMGB1P1-201ENST00000522557 636 ntBASIC3.46□□□□□ -1.86
IFT140Q96RY7 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.46□□□□□ -1.86
IFT140Q96RY7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.46□□□□□ -1.86
IFT140Q96RY7 AC012531.5-201ENST00000611375 151 ntBASIC3.46□□□□□ -1.86
IFT140Q96RY7 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
IFT140Q96RY7 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
IFT140Q96RY7 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.45□□□□□ -1.86
IFT140Q96RY7 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
IFT140Q96RY7 MTCO1P14-201ENST00000441695 1559 ntBASIC3.45□□□□□ -1.86
IFT140Q96RY7 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
IFT140Q96RY7 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
IFT140Q96RY7 SNORA25.6-201ENST00000364121 118 ntBASIC3.45□□□□□ -1.86
IFT140Q96RY7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.45□□□□□ -1.86
IFT140Q96RY7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.45□□□□□ -1.86
IFT140Q96RY7 AL591719.1-201ENST00000444669 744 ntBASIC3.45□□□□□ -1.86
IFT140Q96RY7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.45□□□□□ -1.86
IFT140Q96RY7 RPAP2P1-201ENST00000603626 1168 ntBASIC3.45□□□□□ -1.86
IFT140Q96RY7 AC009452.1-201ENST00000640823 606 ntBASIC3.45□□□□□ -1.86
IFT140Q96RY7 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
IFT140Q96RY7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.45□□□□□ -1.86
IFT140Q96RY7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.45□□□□□ -1.86
IFT140Q96RY7 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
IFT140Q96RY7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
IFT140Q96RY7 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
IFT140Q96RY7 SDCBPP3-201ENST00000419629 891 ntBASIC3.44□□□□□ -1.86
IFT140Q96RY7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.44□□□□□ -1.86
IFT140Q96RY7 FABP5P13-201ENST00000452144 328 ntBASIC3.44□□□□□ -1.86
IFT140Q96RY7 snoU13.18-201ENST00000459483 104 ntBASIC3.44□□□□□ -1.86
IFT140Q96RY7 snoZ278.1-201ENST00000517059 112 ntBASIC3.44□□□□□ -1.86
IFT140Q96RY7 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.44□□□□□ -1.86
IFT140Q96RY7 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.44□□□□□ -1.86
IFT140Q96RY7 AL645944.1-201ENST00000603857 493 ntBASIC3.44□□□□□ -1.86
IFT140Q96RY7 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.44□□□□□ -1.86
IFT140Q96RY7 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
IFT140Q96RY7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
IFT140Q96RY7 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
IFT140Q96RY7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
IFT140Q96RY7 RNA5SP190-201ENST00000365222 118 ntBASIC3.43□□□□□ -1.86
IFT140Q96RY7 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
IFT140Q96RY7 AP1B1P2-201ENST00000416196 106 ntBASIC3.43□□□□□ -1.86
IFT140Q96RY7 NDUFA5P4-201ENST00000436704 385 ntBASIC3.43□□□□□ -1.86
IFT140Q96RY7 MTCYBP31-201ENST00000438855 1122 ntBASIC3.43□□□□□ -1.86
IFT140Q96RY7 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.43□□□□□ -1.86
IFT140Q96RY7 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.43□□□□□ -1.86
IFT140Q96RY7 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.43□□□□□ -1.86
IFT140Q96RY7 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.43□□□□□ -1.86
IFT140Q96RY7 AL139276.1-201ENST00000311910 1001 ntBASIC3.42□□□□□ -1.86
IFT140Q96RY7 SEC63P1-201ENST00000425785 1258 ntBASIC3.42□□□□□ -1.86
IFT140Q96RY7 IFNWP4-201ENST00000453148 294 ntBASIC3.42□□□□□ -1.86
IFT140Q96RY7 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.42□□□□□ -1.86
IFT140Q96RY7 NDUFA5P6-201ENST00000542110 379 ntBASIC3.42□□□□□ -1.86
IFT140Q96RY7 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.42□□□□□ -1.86
IFT140Q96RY7 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.42□□□□□ -1.86
IFT140Q96RY7 AL356280.1-201ENST00000603614 379 ntBASIC3.42□□□□□ -1.86
IFT140Q96RY7 AC091953.2-201ENST00000623979 160 ntBASIC3.42□□□□□ -1.86
IFT140Q96RY7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
IFT140Q96RY7 MTND5P12-201ENST00000502851 1449 ntBASIC3.42□□□□□ -1.86
IFT140Q96RY7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
IFT140Q96RY7 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
IFT140Q96RY7 AC093151.1-201ENST00000427711 313 ntBASIC3.41□□□□□ -1.86
IFT140Q96RY7 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.41□□□□□ -1.86
IFT140Q96RY7 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.41□□□□□ -1.86
IFT140Q96RY7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.41□□□□□ -1.86
IFT140Q96RY7 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.41□□□□□ -1.86
IFT140Q96RY7 AC120053.1-201ENST00000607706 736 ntBASIC3.41□□□□□ -1.86
IFT140Q96RY7 AC002076.2-201ENST00000617362 122 ntBASIC3.41□□□□□ -1.86
IFT140Q96RY7 C2orf27A-204ENST00000623058 969 ntBASIC3.41□□□□□ -1.86
IFT140Q96RY7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
IFT140Q96RY7 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
IFT140Q96RY7 AC010680.1-201ENST00000590024 3590 ntBASIC3.41□□□□□ -1.86
IFT140Q96RY7 MTND5P23-201ENST00000430812 1655 ntBASIC3.41□□□□□ -1.86
IFT140Q96RY7 DYNLT3P1-201ENST00000378574 347 ntBASIC3.41□□□□□ -1.86
IFT140Q96RY7 AC019129.1-201ENST00000403786 261 ntBASIC3.41□□□□□ -1.86
IFT140Q96RY7 RNU4-62P-201ENST00000410125 130 ntBASIC3.41□□□□□ -1.86
IFT140Q96RY7 RPS15AP12-201ENST00000419498 388 ntBASIC3.41□□□□□ -1.86
IFT140Q96RY7 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.41□□□□□ -1.86
IFT140Q96RY7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.41□□□□□ -1.86
IFT140Q96RY7 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.41□□□□□ -1.86
IFT140Q96RY7 GSTA11P-201ENST00000452866 669 ntBASIC3.41□□□□□ -1.86
IFT140Q96RY7 AL163540.1-201ENST00000485382 386 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms