Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 AC091152.2-201ENST00000591628 2569 ntBASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 FAM133CP-201ENST00000332869 704 ntBASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 RPL7P26-201ENST00000333817 754 ntBASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 RNU6-157P-201ENST00000383957 107 ntBASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 HMGB3P23-201ENST00000414981 585 ntBASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 AL008987.1-201ENST00000415528 237 ntBASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 MTATP6P4-201ENST00000427725 675 ntBASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 AL592447.1-201ENST00000447592 540 ntBASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 AC007967.1-201ENST00000455422 1159 ntBASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 AC092185.1-201ENST00000491371 97 ntBASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 RPL7P23-201ENST00000493874 747 ntBASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 AL139099.1-201ENST00000497398 403 ntBASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 AC024589.1-201ENST00000512207 263 ntBASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 MTCYBP43-201ENST00000513621 740 ntBASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 RNA5SP164-201ENST00000516533 110 ntBASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 RPL12P22-201ENST00000519073 490 ntBASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 FAM60DP-201ENST00000524174 632 ntBASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 UBE2NP1-201ENST00000545592 458 ntBASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 AC125611.2-201ENST00000551907 647 ntBASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 AC055876.1-202ENST00000567053 138 ntBASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 IPO5P1-202ENST00000600039 287 ntBASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 AP001429.1-201ENST00000602568 530 ntBASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 AL596327.1-201ENST00000603629 213 ntBASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 MIR6748-201ENST00000610433 71 ntBASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 AC002550.2-201ENST00000621246 394 ntBASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 AC079684.1-201ENST00000621405 437 ntBASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 AC008443.7-201ENST00000622195 246 ntBASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 MIR3653-201ENST00000625572 110 ntBASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
RAB3IPQ96QF0 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 AC011477.1-204ENST00000623416 1325 ntBASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 AL356421.1-201ENST00000403255 413 ntBASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 TPT1P2-201ENST00000413105 503 ntBASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 Z97055.1-201ENST00000419730 712 ntBASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 AL117351.1-201ENST00000438864 766 ntBASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 UQCRHP4-201ENST00000471686 272 ntBASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 AC104563.1-201ENST00000476147 376 ntBASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 AC091167.1-201ENST00000492017 396 ntBASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 AC108475.1-201ENST00000507880 950 ntBASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 AC109464.2-201ENST00000510242 943 ntBASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.53□□□□□ -1.84
RAB3IPQ96QF0 AC104027.1-201ENST00000521887 300 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms