Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC079780.1-201ENST00000428259 207 ntBASIC3.2□□□□□ -1.9
RPRD1AQ96P16 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.2□□□□□ -1.9
RPRD1AQ96P16 AL592437.1-201ENST00000443781 492 ntBASIC3.2□□□□□ -1.9
RPRD1AQ96P16 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.2□□□□□ -1.9
RPRD1AQ96P16 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.2□□□□□ -1.9
RPRD1AQ96P16 AP001992.1-205ENST00000462248 379 ntBASIC3.2□□□□□ -1.9
RPRD1AQ96P16 HMGB1P25-201ENST00000468402 607 ntBASIC3.2□□□□□ -1.9
RPRD1AQ96P16 RPS17P11-201ENST00000474297 293 ntBASIC3.2□□□□□ -1.9
RPRD1AQ96P16 AC093767.1-201ENST00000504523 156 ntBASIC3.2□□□□□ -1.9
RPRD1AQ96P16 RNU1-143P-201ENST00000516296 146 ntBASIC3.2□□□□□ -1.9
RPRD1AQ96P16 SNORA74D-201ENST00000516404 141 ntBASIC3.2□□□□□ -1.9
RPRD1AQ96P16 AC019227.1-201ENST00000526902 510 ntBASIC3.2□□□□□ -1.9
RPRD1AQ96P16 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.2□□□□□ -1.9
RPRD1AQ96P16 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.2□□□□□ -1.9
RPRD1AQ96P16 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.2□□□□□ -1.9
RPRD1AQ96P16 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.2□□□□□ -1.9
RPRD1AQ96P16 SULT1C2P1-202ENST00000562418 459 ntBASIC3.2□□□□□ -1.9
RPRD1AQ96P16 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.2□□□□□ -1.9
RPRD1AQ96P16 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.2□□□□□ -1.9
RPRD1AQ96P16 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.2□□□□□ -1.9
RPRD1AQ96P16 AP001029.3-201ENST00000588063 596 ntBASIC3.2□□□□□ -1.9
RPRD1AQ96P16 AL158211.2-201ENST00000607282 395 ntBASIC3.2□□□□□ -1.9
RPRD1AQ96P16 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.2□□□□□ -1.9
RPRD1AQ96P16 U1.23-201ENST00000610293 146 ntBASIC3.2□□□□□ -1.9
RPRD1AQ96P16 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.2□□□□□ -1.9
RPRD1AQ96P16 RNU1-68P-201ENST00000615382 146 ntBASIC3.2□□□□□ -1.9
RPRD1AQ96P16 U1.39-201ENST00000621562 146 ntBASIC3.2□□□□□ -1.9
RPRD1AQ96P16 MIR622-201ENST00000638396 96 ntBASIC3.2□□□□□ -1.9
RPRD1AQ96P16 AC139713.2-210ENST00000641741 992 ntBASIC3.2□□□□□ -1.9
RPRD1AQ96P16 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RPRD1AQ96P16 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RPRD1AQ96P16 API5P2-201ENST00000397055 1498 ntBASIC3.2□□□□□ -1.9
RPRD1AQ96P16 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RPRD1AQ96P16 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
RPRD1AQ96P16 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
RPRD1AQ96P16 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.19□□□□□ -1.9
RPRD1AQ96P16 NUP58P1-201ENST00000502546 1738 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RPRD1AQ96P16 MIR422A-201ENST00000362286 90 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.19□□□□□ -1.9
RPRD1AQ96P16 SNORA51.6-201ENST00000384151 125 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 MIR217-201ENST00000384817 110 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 MIR483-201ENST00000385070 76 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 MIR887-201ENST00000401258 79 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 TMSB4XP8-201ENST00000402089 135 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 AL133264.1-201ENST00000407157 562 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 TMSB4XP6-201ENST00000415187 135 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 TMSB4XP1-201ENST00000424567 135 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.19□□□□□ -1.9
RPRD1AQ96P16 MTCYBP15-201ENST00000433123 1127 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 COX6CP18-201ENST00000448769 222 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.19□□□□□ -1.9
RPRD1AQ96P16 RPS20P24-201ENST00000457473 361 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 AC010301.1-201ENST00000473936 355 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 ST13P14-201ENST00000474095 734 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 AC096751.1-202ENST00000502691 1067 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 AC114967.1-201ENST00000504890 259 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 AC105914.1-201ENST00000511798 226 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.19□□□□□ -1.9
RPRD1AQ96P16 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.19□□□□□ -1.9
RPRD1AQ96P16 AP001317.1-201ENST00000531194 960 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 AC007536.1-201ENST00000533382 349 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.19□□□□□ -1.9
RPRD1AQ96P16 GTF2IP8-201ENST00000560687 584 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 SNORD84-203ENST00000584275 78 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 AC090330.1-201ENST00000588646 764 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.19□□□□□ -1.9
RPRD1AQ96P16 BDH2P1-201ENST00000602288 736 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 AC012669.1-201ENST00000603209 283 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 AL162274.2-201ENST00000614406 332 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 AC008083.4-201ENST00000615076 444 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 AC092650.2-201ENST00000619984 902 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 AC091953.5-201ENST00000622919 233 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 AP001002.2-201ENST00000625137 386 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.19□□□□□ -1.9
RPRD1AQ96P16 AL353743.1-202ENST00000431724 1695 ntBASIC3.19□□□□□ -1.9
RPRD1AQ96P16 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RPRD1AQ96P16 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RPRD1AQ96P16 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
RPRD1AQ96P16 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
RPRD1AQ96P16 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RPRD1AQ96P16 DBF4P1-201ENST00000412976 1892 ntBASIC3.18□□□□□ -1.9
RPRD1AQ96P16 MTND5P24-201ENST00000438892 1767 ntBASIC3.18□□□□□ -1.9
RPRD1AQ96P16 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.18□□□□□ -1.9
RPRD1AQ96P16 AL049780.3-201ENST00000624612 1583 ntBASIC3.18□□□□□ -1.9
RPRD1AQ96P16 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RPRD1AQ96P16 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RPRD1AQ96P16 SNORD56.3-201ENST00000363507 71 ntBASIC3.18□□□□□ -1.9
RPRD1AQ96P16 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.18□□□□□ -1.9
RPRD1AQ96P16 RPL7P25-201ENST00000404151 721 ntBASIC3.18□□□□□ -1.9
RPRD1AQ96P16 AL024474.1-201ENST00000404655 591 ntBASIC3.18□□□□□ -1.9
RPRD1AQ96P16 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.18□□□□□ -1.9
RPRD1AQ96P16 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.18□□□□□ -1.9
RPRD1AQ96P16 BOLA3P4-201ENST00000418151 400 ntBASIC3.18□□□□□ -1.9
RPRD1AQ96P16 AC092634.6-201ENST00000418558 192 ntBASIC3.18□□□□□ -1.9
RPRD1AQ96P16 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.18□□□□□ -1.9
RPRD1AQ96P16 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.18□□□□□ -1.9
RPRD1AQ96P16 RAC1P8-201ENST00000427086 527 ntBASIC3.18□□□□□ -1.9
RPRD1AQ96P16 SNRPEP4-201ENST00000435815 279 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms