Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
IFT43Q96FT9 RNU1-74P-201ENST00000384108 171 ntBASIC5.7□□□□□ -1.5
IFT43Q96FT9 RNU6-890P-201ENST00000384121 107 ntBASIC5.7□□□□□ -1.5
IFT43Q96FT9 Y_RNA.455-201ENST00000384230 98 ntBASIC5.7□□□□□ -1.5
IFT43Q96FT9 RNY1P14-201ENST00000384426 108 ntBASIC5.7□□□□□ -1.5
IFT43Q96FT9 RNU11-4P-201ENST00000391149 133 ntBASIC5.7□□□□□ -1.5
IFT43Q96FT9 ENSAP1-201ENST00000392855 326 ntBASIC5.7□□□□□ -1.5
IFT43Q96FT9 AC005042.1-201ENST00000393397 800 ntBASIC5.7□□□□□ -1.5
IFT43Q96FT9 BX682237.1-201ENST00000415016 335 ntBASIC5.7□□□□□ -1.5
IFT43Q96FT9 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.7□□□□□ -1.5
IFT43Q96FT9 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
IFT43Q96FT9 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
IFT43Q96FT9 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.7□□□□□ -1.5
IFT43Q96FT9 RPL21P112-201ENST00000434403 463 ntBASIC5.7□□□□□ -1.5
IFT43Q96FT9 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.7□□□□□ -1.5
IFT43Q96FT9 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.7□□□□□ -1.5
IFT43Q96FT9 EEF1B2P6-201ENST00000445713 673 ntBASIC5.7□□□□□ -1.5
IFT43Q96FT9 RPS20P21-201ENST00000466859 343 ntBASIC5.7□□□□□ -1.5
IFT43Q96FT9 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.7□□□□□ -1.5
IFT43Q96FT9 MTCO3P44-201ENST00000510977 541 ntBASIC5.7□□□□□ -1.5
IFT43Q96FT9 Y_RNA.661-201ENST00000516003 99 ntBASIC5.7□□□□□ -1.5
IFT43Q96FT9 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.7□□□□□ -1.5
IFT43Q96FT9 AC100870.1-201ENST00000522035 505 ntBASIC5.7□□□□□ -1.5
IFT43Q96FT9 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.7□□□□□ -1.5
IFT43Q96FT9 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.7□□□□□ -1.5
IFT43Q96FT9 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.7□□□□□ -1.5
IFT43Q96FT9 MIR4443-201ENST00000585052 53 ntBASIC5.7□□□□□ -1.5
IFT43Q96FT9 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.7□□□□□ -1.5
IFT43Q96FT9 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.7□□□□□ -1.5
IFT43Q96FT9 MIR6128-201ENST00000615528 109 ntBASIC5.7□□□□□ -1.5
IFT43Q96FT9 ATP5A1P2-202ENST00000616464 443 ntBASIC5.7□□□□□ -1.5
IFT43Q96FT9 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.7□□□□□ -1.5
IFT43Q96FT9 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
IFT43Q96FT9 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
IFT43Q96FT9 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
IFT43Q96FT9 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.7□□□□□ -1.5
IFT43Q96FT9 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.7□□□□□ -1.5
IFT43Q96FT9 AL022311.1-201ENST00000623726 19416 ntBASIC5.7□□□□□ -1.5
IFT43Q96FT9 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
IFT43Q96FT9 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.7□□□□□ -1.5
IFT43Q96FT9 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
IFT43Q96FT9 IQCB2P-201ENST00000401788 1633 ntBASIC5.7□□□□□ -1.5
IFT43Q96FT9 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
IFT43Q96FT9 OR4F13P-202ENST00000560066 2054 ntBASIC5.7□□□□□ -1.5
IFT43Q96FT9 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.7□□□□□ -1.5
IFT43Q96FT9 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
IFT43Q96FT9 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
IFT43Q96FT9 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
IFT43Q96FT9 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
IFT43Q96FT9 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
IFT43Q96FT9 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
IFT43Q96FT9 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
IFT43Q96FT9 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
IFT43Q96FT9 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
IFT43Q96FT9 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
IFT43Q96FT9 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
IFT43Q96FT9 RNA5SP326-201ENST00000363209 110 ntBASIC5.69□□□□□ -1.5
IFT43Q96FT9 RNU6-379P-201ENST00000363813 104 ntBASIC5.69□□□□□ -1.5
IFT43Q96FT9 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.69□□□□□ -1.5
IFT43Q96FT9 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.69□□□□□ -1.5
IFT43Q96FT9 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.69□□□□□ -1.5
IFT43Q96FT9 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.69□□□□□ -1.5
IFT43Q96FT9 RPS12P5-201ENST00000423449 371 ntBASIC5.69□□□□□ -1.5
IFT43Q96FT9 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.69□□□□□ -1.5
IFT43Q96FT9 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.69□□□□□ -1.5
IFT43Q96FT9 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.69□□□□□ -1.5
IFT43Q96FT9 RN7SL432P-201ENST00000484057 298 ntBASIC5.69□□□□□ -1.5
IFT43Q96FT9 AC110794.1-201ENST00000505816 425 ntBASIC5.69□□□□□ -1.5
IFT43Q96FT9 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.69□□□□□ -1.5
IFT43Q96FT9 IGLV3-24-201ENST00000517477 197 ntBASIC5.69□□□□□ -1.5
IFT43Q96FT9 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.69□□□□□ -1.5
IFT43Q96FT9 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
IFT43Q96FT9 AC015720.2-201ENST00000567709 334 ntBASIC5.69□□□□□ -1.5
IFT43Q96FT9 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.69□□□□□ -1.5
IFT43Q96FT9 MIR3941-201ENST00000582572 103 ntBASIC5.69□□□□□ -1.5
IFT43Q96FT9 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.69□□□□□ -1.5
IFT43Q96FT9 AC013244.1-201ENST00000604279 193 ntBASIC5.69□□□□□ -1.5
IFT43Q96FT9 AC100812.1-201ENST00000607622 580 ntBASIC5.69□□□□□ -1.5
IFT43Q96FT9 FAM157A-202ENST00000615155 405 ntBASIC5.69□□□□□ -1.5
IFT43Q96FT9 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.69□□□□□ -1.5
IFT43Q96FT9 AC092608.2-201ENST00000624427 218 ntBASIC5.69□□□□□ -1.5
IFT43Q96FT9 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
IFT43Q96FT9 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
IFT43Q96FT9 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
IFT43Q96FT9 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
IFT43Q96FT9 AC144833.1-201ENST00000567953 4089 ntBASIC5.69□□□□□ -1.5
IFT43Q96FT9 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
IFT43Q96FT9 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
IFT43Q96FT9 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
IFT43Q96FT9 SRRM1P3-201ENST00000426911 2678 ntBASIC5.69□□□□□ -1.5
IFT43Q96FT9 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
IFT43Q96FT9 AC104964.3-201ENST00000606115 2860 ntBASIC5.69□□□□□ -1.5
IFT43Q96FT9 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
IFT43Q96FT9 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.68□□□□□ -1.5
IFT43Q96FT9 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
IFT43Q96FT9 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
IFT43Q96FT9 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.68□□□□□ -1.5
IFT43Q96FT9 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
IFT43Q96FT9 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
IFT43Q96FT9 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms