Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AP001596.2-201ENST00000608410 312 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AC006329.2-201ENST00000611491 394 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AL355073.2-201ENST00000612106 557 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 MIR6798-201ENST00000612887 67 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AL590099.1-201ENST00000615276 138 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AL021997.2-201ENST00000615674 271 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AL138721.1-201ENST00000616756 179 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AC091953.2-201ENST00000623979 160 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AC022893.2-201ENST00000564832 3296 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 LINC01355-201ENST00000566551 5444 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AL356489.2-201ENST00000566968 3528 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 AC025031.4-201ENST00000621248 3271 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 Y_RNA.88-201ENST00000363029 99 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 SNORA20.2-201ENST00000383922 131 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 RNU6-761P-201ENST00000384148 107 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 Y_RNA.481-201ENST00000384373 102 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 SNORA70E-201ENST00000384492 135 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 AC097374.1-203ENST00000400783 485 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 HDGFP1-201ENST00000405943 252 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 MIR1911-201ENST00000410783 80 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 HMGN1P24-201ENST00000412282 298 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 PDSS1P1-201ENST00000422953 1114 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 AC019097.1-201ENST00000424783 735 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 AC006548.1-201ENST00000427470 102 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 ABCF2P2-201ENST00000450549 296 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 AC104308.1-201ENST00000454621 333 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 SNORD121B-201ENST00000458838 81 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 MTCO2P29-201ENST00000465212 189 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 RPL35AP15-201ENST00000468042 339 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 AC055855.1-201ENST00000489563 579 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 AC079382.1-201ENST00000493346 557 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 AC008694.2-201ENST00000517591 306 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 OR8L1P-201ENST00000534005 955 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 AP003034.1-201ENST00000534621 422 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 HMGB3P26-201ENST00000560051 582 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 HNRNPCP4-201ENST00000571636 900 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 MIR4458-201ENST00000578872 75 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 MIR3146-201ENST00000580367 79 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 KC877982.1-201ENST00000602313 470 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 AP000907.4-201ENST00000604143 237 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 AC112230.1-201ENST00000604342 547 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 AC007363.1-201ENST00000604736 620 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 AC104458.1-201ENST00000608243 463 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 AC006338.1-201ENST00000618453 749 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 AC007546.1-201ENST00000619452 559 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 AC019278.1-201ENST00000623516 479 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 CR381572.1-201ENST00000625098 102 ntBASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.06□□□□□ -1.76
CTHRC1Q96CG8 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AL133243.3-201ENST00000617415 3004 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms