Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 FAM133DP-201ENST00000464802 691 ntBASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 CBX3P3-201ENST00000508108 532 ntBASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 AC022447.1-201ENST00000515358 464 ntBASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 AP002453.2-201ENST00000533503 320 ntBASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 AC106785.1-201ENST00000565935 262 ntBASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 MIR1254-2-201ENST00000579553 63 ntBASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 AC010678.1-201ENST00000614118 713 ntBASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 AC004825.2-201ENST00000616634 455 ntBASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 AP001486.2-201ENST00000561652 5113 ntBASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 RNU6-1279P-201ENST00000383917 103 ntBASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 RN7SKP56-201ENST00000410513 331 ntBASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 RNU4-6P-201ENST00000410804 122 ntBASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 AL356095.1-201ENST00000417217 199 ntBASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 RPL21P32-201ENST00000419877 477 ntBASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 EZH2P1-201ENST00000431167 291 ntBASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 MRPS18BP2-201ENST00000434310 759 ntBASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 USP9YP29-201ENST00000445112 563 ntBASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 RNA5SP246-201ENST00000458909 119 ntBASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 AC093824.1-201ENST00000508796 343 ntBASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 MIR5697-201ENST00000578045 78 ntBASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 AL451064.1-201ENST00000607718 471 ntBASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 AC103591.3-201ENST00000608684 209 ntBASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 MIR6875-201ENST00000617506 72 ntBASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 AC233309.1-201ENST00000619522 751 ntBASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHMP4CQ96CF2 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 SNORA60-201ENST00000362396 134 ntBASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 RN7SKP33-201ENST00000410942 340 ntBASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 RPS6P12-201ENST00000432491 726 ntBASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 RPL22P17-201ENST00000438729 315 ntBASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 AL592447.1-201ENST00000447592 540 ntBASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 AL590365.1-201ENST00000450788 243 ntBASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 AL353691.1-201ENST00000451332 387 ntBASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 Z82190.1-201ENST00000454534 490 ntBASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 CFTRP1-201ENST00000456646 183 ntBASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 AC112204.1-201ENST00000502591 103 ntBASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 AC108064.1-201ENST00000513791 460 ntBASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 AC099522.1-202ENST00000514718 367 ntBASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 IGKV2-38-201ENST00000517443 247 ntBASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 AP002748.2-201ENST00000528671 348 ntBASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 AC012557.2-201ENST00000605919 418 ntBASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 AC018755.4-201ENST00000619715 454 ntBASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 LINC02471-203ENST00000641941 4752 ntBASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.88□□□□□ -1.63
CHMP4CQ96CF2 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 CCT4P2-201ENST00000233836 1548 ntBASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 MAPK10-372ENST00000641954 3413 ntBASIC4.87□□□□□ -1.63
CHMP4CQ96CF2 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms