Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
AP3S1Q92572 MIR144-201ENST00000384886 86 ntBASIC2.3□□□□□ -2.04
AP3S1Q92572 SNORA48.5-201ENST00000391143 135 ntBASIC2.3□□□□□ -2.04
AP3S1Q92572 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
AP3S1Q92572 FNDC3CP-201ENST00000420795 1155 ntBASIC2.3□□□□□ -2.04
AP3S1Q92572 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.3□□□□□ -2.04
AP3S1Q92572 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.3□□□□□ -2.04
AP3S1Q92572 AC112220.1-201ENST00000434628 355 ntBASIC2.3□□□□□ -2.04
AP3S1Q92572 OR6K5P-201ENST00000447050 945 ntBASIC2.3□□□□□ -2.04
AP3S1Q92572 CACYBPP2-201ENST00000453625 678 ntBASIC2.3□□□□□ -2.04
AP3S1Q92572 AC090543.1-201ENST00000492168 485 ntBASIC2.3□□□□□ -2.04
AP3S1Q92572 AC114322.1-201ENST00000506771 926 ntBASIC2.3□□□□□ -2.04
AP3S1Q92572 CBX3P3-201ENST00000508108 532 ntBASIC2.3□□□□□ -2.04
AP3S1Q92572 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.3□□□□□ -2.04
AP3S1Q92572 RNU6-488P-201ENST00000515918 99 ntBASIC2.3□□□□□ -2.04
AP3S1Q92572 RNA5SP82-201ENST00000516707 92 ntBASIC2.3□□□□□ -2.04
AP3S1Q92572 RN7SKP57-201ENST00000517248 293 ntBASIC2.3□□□□□ -2.04
AP3S1Q92572 PSMA2P1-201ENST00000526365 646 ntBASIC2.3□□□□□ -2.04
AP3S1Q92572 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
AP3S1Q92572 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.3□□□□□ -2.04
AP3S1Q92572 H3F3AP1-201ENST00000559984 334 ntBASIC2.3□□□□□ -2.04
AP3S1Q92572 ACTR3BP3-201ENST00000565577 979 ntBASIC2.3□□□□□ -2.04
AP3S1Q92572 AC079089.3-201ENST00000603094 673 ntBASIC2.3□□□□□ -2.04
AP3S1Q92572 AL137847.3-201ENST00000611521 109 ntBASIC2.3□□□□□ -2.04
AP3S1Q92572 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.3□□□□□ -2.04
AP3S1Q92572 U6.107-201ENST00000637108 79 ntBASIC2.3□□□□□ -2.04
AP3S1Q92572 AL513185.3-201ENST00000433335 1300 ntBASIC2.3□□□□□ -2.04
AP3S1Q92572 AL512283.1-201ENST00000606756 1384 ntBASIC2.3□□□□□ -2.04
AP3S1Q92572 AC010680.1-201ENST00000590024 3590 ntBASIC2.29□□□□□ -2.04
AP3S1Q92572 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.29□□□□□ -2.04
AP3S1Q92572 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
AP3S1Q92572 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.29□□□□□ -2.04
AP3S1Q92572 AL139276.1-201ENST00000311910 1001 ntBASIC2.29□□□□□ -2.04
AP3S1Q92572 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.29□□□□□ -2.04
AP3S1Q92572 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
AP3S1Q92572 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.29□□□□□ -2.04
AP3S1Q92572 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
AP3S1Q92572 AL162578.1-201ENST00000406202 378 ntBASIC2.29□□□□□ -2.04
AP3S1Q92572 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.29□□□□□ -2.04
AP3S1Q92572 AF274854.1-201ENST00000413236 615 ntBASIC2.29□□□□□ -2.04
AP3S1Q92572 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.29□□□□□ -2.04
AP3S1Q92572 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.29□□□□□ -2.04
AP3S1Q92572 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.29□□□□□ -2.04
AP3S1Q92572 EZH2P1-201ENST00000431167 291 ntBASIC2.29□□□□□ -2.04
AP3S1Q92572 HMGN2P31-201ENST00000432430 273 ntBASIC2.29□□□□□ -2.04
AP3S1Q92572 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.29□□□□□ -2.04
AP3S1Q92572 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.29□□□□□ -2.04
AP3S1Q92572 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.29□□□□□ -2.04
AP3S1Q92572 RPS15AP7-201ENST00000439294 405 ntBASIC2.29□□□□□ -2.04
AP3S1Q92572 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.29□□□□□ -2.04
AP3S1Q92572 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.29□□□□□ -2.04
AP3S1Q92572 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.29□□□□□ -2.04
AP3S1Q92572 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.29□□□□□ -2.04
AP3S1Q92572 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.29□□□□□ -2.04
AP3S1Q92572 HMGB3P3-201ENST00000510526 400 ntBASIC2.29□□□□□ -2.04
AP3S1Q92572 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.29□□□□□ -2.04
AP3S1Q92572 AC008885.1-201ENST00000514930 301 ntBASIC2.29□□□□□ -2.04
AP3S1Q92572 AC009812.2-201ENST00000517657 457 ntBASIC2.29□□□□□ -2.04
AP3S1Q92572 SUB1P1-201ENST00000524415 382 ntBASIC2.29□□□□□ -2.04
AP3S1Q92572 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.29□□□□□ -2.04
AP3S1Q92572 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC2.29□□□□□ -2.04
AP3S1Q92572 AC084824.1-201ENST00000550917 1005 ntBASIC2.29□□□□□ -2.04
AP3S1Q92572 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.29□□□□□ -2.04
AP3S1Q92572 MYL12BP1-201ENST00000569826 507 ntBASIC2.29□□□□□ -2.04
AP3S1Q92572 OR1M4P-201ENST00000589199 287 ntBASIC2.29□□□□□ -2.04
AP3S1Q92572 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC2.29□□□□□ -2.04
AP3S1Q92572 AC009303.3-201ENST00000591103 736 ntBASIC2.29□□□□□ -2.04
AP3S1Q92572 NRBF2P5-201ENST00000603087 788 ntBASIC2.29□□□□□ -2.04
AP3S1Q92572 MTCO3P22-201ENST00000603219 784 ntBASIC2.29□□□□□ -2.04
AP3S1Q92572 AL161629.2-201ENST00000615347 275 ntBASIC2.29□□□□□ -2.04
AP3S1Q92572 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.29□□□□□ -2.04
AP3S1Q92572 CYP3A51P-201ENST00000633513 256 ntBASIC2.29□□□□□ -2.04
AP3S1Q92572 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
AP3S1Q92572 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.28□□□□□ -2.04
AP3S1Q92572 TAB3P1-202ENST00000452645 1634 ntBASIC2.28□□□□□ -2.04
AP3S1Q92572 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
AP3S1Q92572 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
AP3S1Q92572 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
AP3S1Q92572 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
AP3S1Q92572 SNORA80E-201ENST00000384744 137 ntBASIC2.28□□□□□ -2.04
AP3S1Q92572 U3.29-201ENST00000391296 212 ntBASIC2.28□□□□□ -2.04
AP3S1Q92572 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
AP3S1Q92572 CYCSP45-201ENST00000402289 315 ntBASIC2.28□□□□□ -2.04
AP3S1Q92572 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
AP3S1Q92572 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.28□□□□□ -2.04
AP3S1Q92572 AC011816.1-201ENST00000441346 546 ntBASIC2.28□□□□□ -2.04
AP3S1Q92572 AL133547.1-201ENST00000448546 220 ntBASIC2.28□□□□□ -2.04
AP3S1Q92572 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
AP3S1Q92572 AC011753.1-201ENST00000451001 220 ntBASIC2.28□□□□□ -2.04
AP3S1Q92572 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.28□□□□□ -2.04
AP3S1Q92572 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.28□□□□□ -2.04
AP3S1Q92572 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.28□□□□□ -2.04
AP3S1Q92572 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.28□□□□□ -2.04
AP3S1Q92572 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.28□□□□□ -2.04
AP3S1Q92572 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.28□□□□□ -2.04
AP3S1Q92572 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.28□□□□□ -2.04
AP3S1Q92572 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.28□□□□□ -2.04
AP3S1Q92572 SNORA31.13-201ENST00000516624 135 ntBASIC2.28□□□□□ -2.04
AP3S1Q92572 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.28□□□□□ -2.04
AP3S1Q92572 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms