Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TOPBP1Q92547 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TOPBP1Q92547 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TOPBP1Q92547 RNY1P10-201ENST00000363268 113 ntBASIC3.41□□□□□ -1.86
TOPBP1Q92547 AC008173.1-201ENST00000418901 264 ntBASIC3.41□□□□□ -1.86
TOPBP1Q92547 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.41□□□□□ -1.86
TOPBP1Q92547 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.41□□□□□ -1.86
TOPBP1Q92547 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.41□□□□□ -1.86
TOPBP1Q92547 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.41□□□□□ -1.86
TOPBP1Q92547 AC126177.3-201ENST00000551839 688 ntBASIC3.41□□□□□ -1.86
TOPBP1Q92547 AL389895.1-201ENST00000554127 252 ntBASIC3.41□□□□□ -1.86
TOPBP1Q92547 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.41□□□□□ -1.86
TOPBP1Q92547 AL670379.6-201ENST00000603753 252 ntBASIC3.41□□□□□ -1.86
TOPBP1Q92547 AL670379.11-201ENST00000604059 253 ntBASIC3.41□□□□□ -1.86
TOPBP1Q92547 AL160237.3-201ENST00000604114 1013 ntBASIC3.41□□□□□ -1.86
TOPBP1Q92547 AL670379.10-201ENST00000604330 253 ntBASIC3.41□□□□□ -1.86
TOPBP1Q92547 AC008162.1-201ENST00000604718 254 ntBASIC3.41□□□□□ -1.86
TOPBP1Q92547 AL670379.1-201ENST00000604752 252 ntBASIC3.41□□□□□ -1.86
TOPBP1Q92547 AL670379.2-201ENST00000604983 252 ntBASIC3.41□□□□□ -1.86
TOPBP1Q92547 AL670379.5-201ENST00000605253 252 ntBASIC3.41□□□□□ -1.86
TOPBP1Q92547 AL670379.4-201ENST00000605279 254 ntBASIC3.41□□□□□ -1.86
TOPBP1Q92547 AL670379.12-201ENST00000605291 253 ntBASIC3.41□□□□□ -1.86
TOPBP1Q92547 AL670379.8-201ENST00000605353 252 ntBASIC3.41□□□□□ -1.86
TOPBP1Q92547 AL670379.9-201ENST00000605428 253 ntBASIC3.41□□□□□ -1.86
TOPBP1Q92547 AL670379.7-201ENST00000605823 252 ntBASIC3.41□□□□□ -1.86
TOPBP1Q92547 AL135786.2-201ENST00000608422 615 ntBASIC3.41□□□□□ -1.86
TOPBP1Q92547 AC013562.2-201ENST00000611632 603 ntBASIC3.41□□□□□ -1.86
TOPBP1Q92547 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.4□□□□□ -1.86
TOPBP1Q92547 RPL5P19-201ENST00000404228 893 ntBASIC3.4□□□□□ -1.86
TOPBP1Q92547 SNORA81-201ENST00000408493 178 ntBASIC3.4□□□□□ -1.86
TOPBP1Q92547 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.4□□□□□ -1.86
TOPBP1Q92547 HSPE1P22-201ENST00000456856 327 ntBASIC3.4□□□□□ -1.86
TOPBP1Q92547 RN7SKP82-201ENST00000516786 223 ntBASIC3.4□□□□□ -1.86
TOPBP1Q92547 CD24P2-201ENST00000565486 219 ntBASIC3.4□□□□□ -1.86
TOPBP1Q92547 LRRC37A5P-203ENST00000580181 585 ntBASIC3.4□□□□□ -1.86
TOPBP1Q92547 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.4□□□□□ -1.86
TOPBP1Q92547 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.4□□□□□ -1.86
TOPBP1Q92547 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TOPBP1Q92547 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TOPBP1Q92547 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
TOPBP1Q92547 RNA5SP190-201ENST00000365222 118 ntBASIC3.39□□□□□ -1.87
TOPBP1Q92547 AC005005.2-201ENST00000420779 380 ntBASIC3.39□□□□□ -1.87
TOPBP1Q92547 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TOPBP1Q92547 AC011753.1-201ENST00000451001 220 ntBASIC3.39□□□□□ -1.87
TOPBP1Q92547 VTA1P2-201ENST00000520205 911 ntBASIC3.39□□□□□ -1.87
TOPBP1Q92547 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.39□□□□□ -1.87
TOPBP1Q92547 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.39□□□□□ -1.87
TOPBP1Q92547 AC244517.12-201ENST00000623581 663 ntBASIC3.39□□□□□ -1.87
TOPBP1Q92547 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
TOPBP1Q92547 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.39□□□□□ -1.87
TOPBP1Q92547 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.39□□□□□ -1.87
TOPBP1Q92547 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.39□□□□□ -1.87
TOPBP1Q92547 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.39□□□□□ -1.87
TOPBP1Q92547 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TOPBP1Q92547 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.39□□□□□ -1.87
TOPBP1Q92547 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.39□□□□□ -1.87
TOPBP1Q92547 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TOPBP1Q92547 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.39□□□□□ -1.87
TOPBP1Q92547 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.39□□□□□ -1.87
TOPBP1Q92547 SNORA40.18-201ENST00000391200 128 ntBASIC3.39□□□□□ -1.87
TOPBP1Q92547 BTF3P4-201ENST00000418852 495 ntBASIC3.39□□□□□ -1.87
TOPBP1Q92547 AL390023.1-201ENST00000428836 262 ntBASIC3.39□□□□□ -1.87
TOPBP1Q92547 AL138787.1-202ENST00000437804 898 ntBASIC3.39□□□□□ -1.87
TOPBP1Q92547 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TOPBP1Q92547 snoZ278.1-201ENST00000517059 112 ntBASIC3.39□□□□□ -1.87
TOPBP1Q92547 HMGB1P1-201ENST00000522557 636 ntBASIC3.39□□□□□ -1.87
TOPBP1Q92547 AC090819.1-201ENST00000523800 1111 ntBASIC3.39□□□□□ -1.87
TOPBP1Q92547 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.39□□□□□ -1.87
TOPBP1Q92547 MIR4255-201ENST00000579351 72 ntBASIC3.39□□□□□ -1.87
TOPBP1Q92547 OR1S1-201ENST00000624470 978 ntBASIC3.39□□□□□ -1.87
TOPBP1Q92547 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TOPBP1Q92547 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TOPBP1Q92547 FGF7P8-201ENST00000402994 292 ntBASIC3.38□□□□□ -1.87
TOPBP1Q92547 NCSTNP1-201ENST00000406229 144 ntBASIC3.38□□□□□ -1.87
TOPBP1Q92547 RNU4-62P-201ENST00000410125 130 ntBASIC3.38□□□□□ -1.87
TOPBP1Q92547 AIMP1P1-201ENST00000418670 937 ntBASIC3.38□□□□□ -1.87
TOPBP1Q92547 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.38□□□□□ -1.87
TOPBP1Q92547 HMGB3P10-201ENST00000434734 572 ntBASIC3.38□□□□□ -1.87
TOPBP1Q92547 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.38□□□□□ -1.87
TOPBP1Q92547 RPL36AP6-201ENST00000435770 321 ntBASIC3.38□□□□□ -1.87
TOPBP1Q92547 RPL23AP63-201ENST00000498752 471 ntBASIC3.38□□□□□ -1.87
TOPBP1Q92547 NAMPTP2-201ENST00000505629 1115 ntBASIC3.38□□□□□ -1.87
TOPBP1Q92547 AC108078.2-201ENST00000510750 236 ntBASIC3.38□□□□□ -1.87
TOPBP1Q92547 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.38□□□□□ -1.87
TOPBP1Q92547 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.38□□□□□ -1.87
TOPBP1Q92547 CUL4AP1-201ENST00000514750 1863 ntBASIC3.38□□□□□ -1.87
TOPBP1Q92547 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.38□□□□□ -1.87
TOPBP1Q92547 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
TOPBP1Q92547 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TOPBP1Q92547 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.37□□□□□ -1.87
TOPBP1Q92547 MIR499A-201ENST00000384903 122 ntBASIC3.37□□□□□ -1.87
TOPBP1Q92547 RPL23AP44-201ENST00000482216 473 ntBASIC3.37□□□□□ -1.87
TOPBP1Q92547 AC005840.1-201ENST00000498412 377 ntBASIC3.37□□□□□ -1.87
TOPBP1Q92547 AC093331.1-201ENST00000521474 169 ntBASIC3.37□□□□□ -1.87
TOPBP1Q92547 AC025260.1-201ENST00000548858 430 ntBASIC3.37□□□□□ -1.87
TOPBP1Q92547 ISCA1P3-201ENST00000577104 373 ntBASIC3.37□□□□□ -1.87
TOPBP1Q92547 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.37□□□□□ -1.87
TOPBP1Q92547 VN1R79P-201ENST00000593540 513 ntBASIC3.37□□□□□ -1.87
TOPBP1Q92547 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TOPBP1Q92547 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms