Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 FRG1BP-201ENST00000278882 761 ntBASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 RNA5SP447-201ENST00000363749 119 ntBASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 RNU6-867P-201ENST00000364956 107 ntBASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 Y_RNA.372-201ENST00000365599 102 ntBASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 Y_RNA.450-201ENST00000384198 113 ntBASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 AL590002.1-201ENST00000406554 418 ntBASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 MIR1277-201ENST00000408536 78 ntBASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 RNU2-8P-201ENST00000410727 190 ntBASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 AL359704.1-201ENST00000411586 781 ntBASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 AC078974.1-201ENST00000411597 223 ntBASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 AC245052.5-201ENST00000416320 649 ntBASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 AC069157.1-201ENST00000421749 137 ntBASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 RPS29P17-201ENST00000430795 166 ntBASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 WASF1P1-201ENST00000447560 1131 ntBASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 FABP3P2-201ENST00000453169 399 ntBASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 AL359385.1-201ENST00000456509 365 ntBASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 AC022034.3-201ENST00000471393 478 ntBASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 RPL35P6-201ENST00000490024 372 ntBASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 RPL31P61-201ENST00000496160 376 ntBASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 AC008958.1-201ENST00000511047 682 ntBASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 AC010493.1-201ENST00000513479 292 ntBASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 MIR548S-201ENST00000581352 82 ntBASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 AC006504.3-201ENST00000586818 523 ntBASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 AC011816.2-201ENST00000607089 556 ntBASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 AL590282.1-201ENST00000610379 1136 ntBASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 MIR6748-201ENST00000610433 71 ntBASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 FAM27D1-201ENST00000612308 341 ntBASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ATG4AQ8WYN0 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 AC018555.1-201ENST00000567548 1980 ntBASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 RNU1-132P-201ENST00000364300 164 ntBASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 Y_RNA.234-201ENST00000364409 97 ntBASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 RNU6-1103P-201ENST00000384150 107 ntBASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 CALM2P3-201ENST00000400429 449 ntBASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 FAR2P2-201ENST00000413041 594 ntBASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 DPPA2P1-201ENST00000428060 556 ntBASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 AC011742.1-201ENST00000431448 434 ntBASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 NEK4P1-201ENST00000433383 879 ntBASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 RPS20P1-201ENST00000434853 354 ntBASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 AC006011.1-201ENST00000442758 349 ntBASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 RPL7P52-201ENST00000449200 742 ntBASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 BX276092.4-201ENST00000452056 248 ntBASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 C1DP4-201ENST00000455429 424 ntBASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 snoU13.8-201ENST00000458890 104 ntBASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 RPL7P15-201ENST00000461190 712 ntBASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 HMGB1P21-201ENST00000502313 581 ntBASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 AC019235.1-201ENST00000503847 207 ntBASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 FAM92A1P2-202ENST00000504766 877 ntBASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 AC114967.1-201ENST00000504890 259 ntBASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 AC022790.1-201ENST00000522872 204 ntBASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 AC123904.2-201ENST00000548059 300 ntBASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 TVP23BP1-201ENST00000557500 617 ntBASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms