Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 RNU6-1317P-201ENST00000364582 104 ntBASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 MIR19A-201ENST00000384878 82 ntBASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 SRSF1P1-201ENST00000424058 520 ntBASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 CALM2P2-201ENST00000428512 440 ntBASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 OR4C10P-201ENST00000434991 931 ntBASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 FTH1P1-201ENST00000437933 532 ntBASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 RNU7-167P-201ENST00000459160 62 ntBASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 TBCAP3-201ENST00000512475 312 ntBASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 IGKV2-36-201ENST00000519999 223 ntBASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 MIR6810-201ENST00000622701 70 ntBASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 AP000550.3-201ENST00000637734 379 ntBASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 AC232271.1-201ENST00000602455 2715 ntBASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 AL359893.1-201ENST00000447628 1580 ntBASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 AL138713.1-201ENST00000624026 2130 ntBASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 RNU6-1266P-201ENST00000362794 105 ntBASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 SNORA23-201ENST00000365128 182 ntBASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 Y_RNA.471-201ENST00000384312 102 ntBASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 SNORA24.1-201ENST00000384401 135 ntBASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 RNU6-959P-201ENST00000384671 107 ntBASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 AL133173.1-201ENST00000423458 397 ntBASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 RHOT1P3-201ENST00000436571 331 ntBASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 FER-202ENST00000438717 1531 ntTSL 2 BASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 AC006466.1-201ENST00000438721 289 ntBASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 CYCSP34-201ENST00000458172 304 ntBASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 AC072052.1-201ENST00000496556 306 ntBASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 AC034114.1-201ENST00000520293 285 ntBASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 AC012339.2-201ENST00000523996 453 ntBASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 THAP12P4-201ENST00000528321 2266 ntBASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 AC073410.2-201ENST00000603240 332 ntBASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
NKX2-3Q8TAU0 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 AC022031.1-201ENST00000585985 2593 ntBASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 SNORD81.1-201ENST00000363064 77 ntBASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 RNU1-136P-201ENST00000384181 164 ntBASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 RNU6-441P-201ENST00000384545 106 ntBASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 RNU6-278P-201ENST00000390945 109 ntBASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 RNU2-22P-201ENST00000411266 212 ntBASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 AL158071.1-201ENST00000430315 461 ntBASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 RPL7L1P9-201ENST00000431298 745 ntBASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 AC004866.2-201ENST00000438285 481 ntBASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 RNU1-88P-201ENST00000459274 128 ntBASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 RPL21P104-201ENST00000464143 478 ntBASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 AC087884.1-201ENST00000469738 328 ntBASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 AC098869.1-201ENST00000481627 292 ntBASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 AC020893.1-201ENST00000502452 580 ntBASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 AC074255.1-201ENST00000511259 501 ntBASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 MRPS21P7-201ENST00000566937 238 ntBASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 AC004584.2-201ENST00000570407 410 ntBASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 MIR3691-201ENST00000578066 90 ntBASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 Z83818.1-201ENST00000603584 150 ntBASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 AC100827.5-201ENST00000615883 426 ntBASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms