Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MAPK10-266ENST00000641066 6555 ntBASIC2.81□□□□□ -1.96
CLHC1Q8NHS4 AC009487.2-201ENST00000420969 6821 ntBASIC2.81□□□□□ -1.96
CLHC1Q8NHS4 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
CLHC1Q8NHS4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CLHC1Q8NHS4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CLHC1Q8NHS4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 AL049780.3-201ENST00000624612 1583 ntBASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 RPL9P7-201ENST00000330965 580 ntBASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 RNU2-25P-201ENST00000411041 191 ntBASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 TATDN1P1-201ENST00000414123 891 ntBASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 AL451074.5-201ENST00000415894 435 ntBASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 CR848007.2-201ENST00000424918 787 ntBASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 MORF4L1P7-201ENST00000426038 703 ntBASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 AC007000.2-201ENST00000442564 487 ntBASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 AC104978.1-201ENST00000449387 391 ntBASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 AC104073.1-201ENST00000451988 151 ntBASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 DNAJC19P8-201ENST00000452887 259 ntBASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 MTND3P24-201ENST00000506306 329 ntBASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 CBX3P3-201ENST00000508108 532 ntBASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 AC104108.1-201ENST00000509930 412 ntBASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 RNU6-751P-201ENST00000516382 101 ntBASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 HIGD1AP6-201ENST00000521833 279 ntBASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 CKS1BP1-201ENST00000555221 240 ntBASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 MTCO3P13-201ENST00000577757 781 ntBASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 AC008739.2-201ENST00000597006 317 ntBASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 HSPE1P7-201ENST00000604681 321 ntBASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 AC069234.5-201ENST00000611056 416 ntBASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 AC107871.2-201ENST00000612894 502 ntBASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 FRG1DP-201ENST00000635586 771 ntBASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.8□□□□□ -1.96
CLHC1Q8NHS4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 MTND5P31-201ENST00000419366 1374 ntBASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 MTND5P1-201ENST00000445440 1375 ntBASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 AC111188.2-201ENST00000529697 1387 ntBASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 OR5BR1P-201ENST00000524992 1330 ntBASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 RNA5SP27-201ENST00000363839 119 ntBASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 RNU6-730P-201ENST00000383954 104 ntBASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 AL356057.2-201ENST00000403318 432 ntBASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 RPL7P30-201ENST00000420888 709 ntBASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 OR6K5P-201ENST00000447050 945 ntBASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 SNRPGP6-201ENST00000451124 220 ntBASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 AL359385.1-201ENST00000456509 365 ntBASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 RNU6-775P-201ENST00000459318 96 ntBASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 OR5G4P-201ENST00000525251 760 ntBASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 AP000867.2-201ENST00000532468 320 ntBASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 OR7K1P-201ENST00000546439 926 ntBASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 MTATP6P25-201ENST00000574491 261 ntBASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 AC138761.3-201ENST00000579993 334 ntBASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 AC016542.1-201ENST00000608259 493 ntBASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 AC021851.1-201ENST00000608537 1082 ntBASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 AC103798.2-201ENST00000624292 632 ntBASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
CLHC1Q8NHS4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 AP000526.1-201ENST00000603308 1388 ntBASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 AL513185.3-201ENST00000433335 1300 ntBASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 RNU1-35P-201ENST00000362782 153 ntBASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 SNORA71.1-201ENST00000364523 117 ntBASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 SNORA70.4-201ENST00000365509 134 ntBASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 MIR649-201ENST00000384843 97 ntBASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 PAICSP7-201ENST00000419829 962 ntBASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 RPL23AP83-201ENST00000434984 473 ntBASIC2.78□□□□□ -1.96
CLHC1Q8NHS4 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms