Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 SSXP9-201ENST00000417503 292 ntBASIC3.29□□□□□ -1.88
CCDC148Q8NFR7 DUTP6-201ENST00000425573 462 ntBASIC3.29□□□□□ -1.88
CCDC148Q8NFR7 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC148Q8NFR7 RPS26P30-201ENST00000443431 335 ntBASIC3.29□□□□□ -1.88
CCDC148Q8NFR7 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC148Q8NFR7 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC148Q8NFR7 AC117522.3-201ENST00000507974 584 ntBASIC3.29□□□□□ -1.88
CCDC148Q8NFR7 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC148Q8NFR7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC148Q8NFR7 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC148Q8NFR7 AC083760.1-201ENST00000589621 670 ntBASIC3.29□□□□□ -1.88
CCDC148Q8NFR7 HSPE1P14-201ENST00000605812 302 ntBASIC3.29□□□□□ -1.88
CCDC148Q8NFR7 AC006249.1-201ENST00000621223 471 ntBASIC3.29□□□□□ -1.88
CCDC148Q8NFR7 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC148Q8NFR7 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
CCDC148Q8NFR7 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC148Q8NFR7 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC148Q8NFR7 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC148Q8NFR7 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 AC009487.2-201ENST00000420969 6821 ntBASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 MIR649-201ENST00000384843 97 ntBASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 AL031121.1-201ENST00000406553 254 ntBASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 FAT1P1-201ENST00000406588 507 ntBASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 AC096664.2-201ENST00000411843 406 ntBASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 AC108729.2-201ENST00000476543 840 ntBASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 SETP6-201ENST00000479329 568 ntBASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 AC080014.1-201ENST00000496877 1201 ntBASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 IGJP1-201ENST00000522682 475 ntBASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 AC124293.1-201ENST00000530034 493 ntBASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 AC104229.1-201ENST00000561364 255 ntBASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 AC010653.1-201ENST00000571108 881 ntBASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 AL451007.1-201ENST00000595491 289 ntBASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 DUXAP4-201ENST00000603046 613 ntBASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 KATNBL1P5-201ENST00000605015 517 ntBASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 AC090115.4-201ENST00000609970 188 ntBASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 AC069234.5-201ENST00000611056 416 ntBASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 AC090116.1-201ENST00000615679 446 ntBASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 MIR6076-201ENST00000617521 113 ntBASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC148Q8NFR7 CUL1P1-201ENST00000509510 2425 ntBASIC3.28□□□□□ -1.89
CCDC148Q8NFR7 AC090740.1-201ENST00000623193 2262 ntBASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 RNU6-799P-201ENST00000363567 107 ntBASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 SNORD56.4-201ENST00000363883 71 ntBASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 SNORD88.1-201ENST00000408684 91 ntBASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 AL606495.1-201ENST00000422100 813 ntBASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 AL009174.1-201ENST00000426577 416 ntBASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 RPP40P1-201ENST00000426762 456 ntBASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 RNA5SP310-201ENST00000459084 116 ntBASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 RPL30P14-201ENST00000482744 348 ntBASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 SNORA31.8-201ENST00000516327 108 ntBASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 AP001804.3-201ENST00000525146 880 ntBASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 AC009570.1-201ENST00000609599 745 ntBASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 RMST_10.1-201ENST00000616309 154 ntBASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 AC006213.5-201ENST00000619673 288 ntBASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC148Q8NFR7 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.26□□□□□ -1.89
CCDC148Q8NFR7 RNU6-989P-201ENST00000362756 107 ntBASIC3.26□□□□□ -1.89
CCDC148Q8NFR7 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
CCDC148Q8NFR7 RNU6-821P-201ENST00000390995 107 ntBASIC3.26□□□□□ -1.89
CCDC148Q8NFR7 ATF1P1-201ENST00000406040 927 ntBASIC3.26□□□□□ -1.89
CCDC148Q8NFR7 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.26□□□□□ -1.89
CCDC148Q8NFR7 AL645937.1-202ENST00000421799 937 ntBASIC3.26□□□□□ -1.89
CCDC148Q8NFR7 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC148Q8NFR7 SAR1AP4-201ENST00000429225 591 ntBASIC3.26□□□□□ -1.89
CCDC148Q8NFR7 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC148Q8NFR7 AC112653.1-201ENST00000443851 386 ntBASIC3.26□□□□□ -1.89
CCDC148Q8NFR7 AL929288.2-201ENST00000446368 407 ntBASIC3.26□□□□□ -1.89
CCDC148Q8NFR7 AC104073.1-201ENST00000451988 151 ntBASIC3.26□□□□□ -1.89
CCDC148Q8NFR7 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC148Q8NFR7 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.26□□□□□ -1.89
CCDC148Q8NFR7 HPRT1P3-201ENST00000539521 576 ntBASIC3.26□□□□□ -1.89
CCDC148Q8NFR7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC148Q8NFR7 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.26□□□□□ -1.89
CCDC148Q8NFR7 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms