Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 SNORA51.2-201ENST00000364595 132 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 RNU1-138P-201ENST00000384093 164 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AL591416.1-201ENST00000404015 867 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AL356806.1-201ENST00000422524 916 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 RPL7P54-201ENST00000438336 674 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 RPL12P25-201ENST00000455592 494 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 NFU1-207ENST00000462320 558 ntTSL 4 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC135721.1-201ENST00000497954 479 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC123904.3-201ENST00000547218 814 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AL355816.1-201ENST00000607951 118 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 CRYM-AS1-204ENST00000637983 556 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 RNU6-582P-201ENST00000362989 107 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 HMGB1P10-201ENST00000395823 563 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 YWHAQP7-201ENST00000603536 658 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC067838.1-201ENST00000606064 577 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC131902.3-201ENST00000611767 581 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 RFC1-217ENST00000639695 867 ntTSL 5 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 USP44-208ENST00000552440 1818 ntTSL 5 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AL139276.1-201ENST00000311910 1001 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 SNORD114-1-201ENST00000362705 72 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 RNY1P10-201ENST00000363268 113 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 MIR499A-201ENST00000384903 122 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 RNA5SP105-201ENST00000391123 113 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 CYCSP49-201ENST00000420810 319 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 TRAPPC2P5-201ENST00000426293 308 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC011753.1-201ENST00000451001 220 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 SNRPGP9-201ENST00000456025 225 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC068587.2-201ENST00000478386 781 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC117522.2-201ENST00000510049 657 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 MTCYBP20-201ENST00000524239 1129 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AP000867.2-201ENST00000532468 320 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC107871.2-201ENST00000612894 502 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AL359715.4-201ENST00000606629 1436 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 RNU1-75P-201ENST00000347264 129 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 HMGB1P12-201ENST00000438594 598 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AL138799.3-201ENST00000438968 350 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AL035551.1-201ENST00000446931 348 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 SNORD108-201ENST00000459332 71 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC146507.1-201ENST00000468335 354 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC104986.1-201ENST00000517978 436 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC006270.2-201ENST00000578523 652 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 SNRPGP15-201ENST00000600149 222 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 LLPHP1-201ENST00000603571 367 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 CR589904.2-201ENST00000612533 440 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC139769.3-201ENST00000618383 175 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 YWHAEP7-203ENST00000622054 312 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC009237.8-201ENST00000445492 379 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 ACTR6P1-201ENST00000514311 1104 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 OR5AK3P-201ENST00000527486 1297 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC105036.1-201ENST00000566222 271 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AL160237.3-201ENST00000604114 1013 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 DLEU2_6.1-201ENST00000610536 112 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 RNU4-7P-201ENST00000364758 141 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms