Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 RPL30P9-201ENST00000465586 330 ntBASIC3.81□□□□□ -1.8
PCDH20Q8N6Y1 AC022034.3-201ENST00000471393 478 ntBASIC3.81□□□□□ -1.8
PCDH20Q8N6Y1 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDH20Q8N6Y1 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.81□□□□□ -1.8
PCDH20Q8N6Y1 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDH20Q8N6Y1 FAM172BP-201ENST00000487497 1089 ntBASIC3.81□□□□□ -1.8
PCDH20Q8N6Y1 RPL21P129-201ENST00000491732 478 ntBASIC3.81□□□□□ -1.8
PCDH20Q8N6Y1 AL024509.2-201ENST00000493462 493 ntBASIC3.81□□□□□ -1.8
PCDH20Q8N6Y1 AC006499.5-201ENST00000505037 514 ntBASIC3.81□□□□□ -1.8
PCDH20Q8N6Y1 HMGN1P11-201ENST00000508668 303 ntBASIC3.81□□□□□ -1.8
PCDH20Q8N6Y1 SNORA67.7-201ENST00000516664 135 ntBASIC3.81□□□□□ -1.8
PCDH20Q8N6Y1 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.81□□□□□ -1.8
PCDH20Q8N6Y1 HIGD1AP10-201ENST00000527837 282 ntBASIC3.81□□□□□ -1.8
PCDH20Q8N6Y1 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDH20Q8N6Y1 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDH20Q8N6Y1 MTCYBP33-201ENST00000575007 1130 ntBASIC3.81□□□□□ -1.8
PCDH20Q8N6Y1 AP001004.1-201ENST00000582468 324 ntBASIC3.81□□□□□ -1.8
PCDH20Q8N6Y1 MIR3158-1-201ENST00000583596 81 ntBASIC3.81□□□□□ -1.8
PCDH20Q8N6Y1 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDH20Q8N6Y1 AL009028.1-201ENST00000604895 802 ntBASIC3.81□□□□□ -1.8
PCDH20Q8N6Y1 BRDTP1-201ENST00000605735 677 ntBASIC3.81□□□□□ -1.8
PCDH20Q8N6Y1 AC105429.2-201ENST00000610567 517 ntBASIC3.81□□□□□ -1.8
PCDH20Q8N6Y1 AC006133.1-201ENST00000617106 264 ntBASIC3.81□□□□□ -1.8
PCDH20Q8N6Y1 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
PCDH20Q8N6Y1 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PCDH20Q8N6Y1 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.81□□□□□ -1.8
PCDH20Q8N6Y1 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
PCDH20Q8N6Y1 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 PABPC1P7-201ENST00000413177 1513 ntBASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 CR383658.2-201ENST00000547576 1525 ntBASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 AL356473.1-201ENST00000406203 1408 ntBASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 AL022578.1-201ENST00000439330 1433 ntBASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 RNA5SP424-201ENST00000390988 115 ntBASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 RNU6-952P-201ENST00000391164 108 ntBASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 SNORA48.7-201ENST00000391302 135 ntBASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 RAB9AP3-201ENST00000412737 573 ntBASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 MORF4L1P6-201ENST00000418771 268 ntBASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 AL159169.1-201ENST00000421119 127 ntBASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 RAB9AP1-201ENST00000449393 573 ntBASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 RPL36AP33-201ENST00000450395 310 ntBASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 AC093809.1-201ENST00000509155 340 ntBASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 RNA5SP208-201ENST00000516156 78 ntBASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 TRMT10BP1-201ENST00000519377 943 ntBASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 SUMO2P20-201ENST00000520803 283 ntBASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 AC007991.1-201ENST00000522680 631 ntBASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 AC008507.1-201ENST00000587506 734 ntBASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 AP001981.2-201ENST00000603241 418 ntBASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 AC115621.1-201ENST00000604653 858 ntBASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 AC010680.4-201ENST00000605334 543 ntBASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 RNU1-30P-201ENST00000606575 163 ntBASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 AL158063.1-201ENST00000615349 536 ntBASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 AC079684.1-201ENST00000621405 437 ntBASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 AC012442.3-202ENST00000636742 206 ntBASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 AL359893.1-201ENST00000447628 1580 ntBASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 ZNF734P-201ENST00000419494 1534 ntBASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDH20Q8N6Y1 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 RNU6-777P-201ENST00000364265 104 ntBASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 RPL21P17-201ENST00000397467 475 ntBASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 AL031679.1-201ENST00000400616 525 ntBASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDH20Q8N6Y1 FNDC3CP-201ENST00000420795 1155 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms