Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 AC084035.1-201ENST00000634543 607 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 AC000403.1-201ENST00000613696 3585 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 AP002907.1-201ENST00000606361 1430 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 AL353743.1-202ENST00000431724 1695 ntBASIC3.27□□□□□ -1.89
CCDC65Q8IXS2 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 MTND5P19-201ENST00000424872 1794 ntBASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 RNU5B-1-201ENST00000363286 116 ntBASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 RNU6-374P-201ENST00000364146 108 ntBASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 RNU6-549P-201ENST00000384433 107 ntBASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 SNORD116-23-201ENST00000384645 92 ntBASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 MIR649-201ENST00000384843 97 ntBASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 AL138885.1-201ENST00000405921 675 ntBASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 UBE2V1P9-201ENST00000414760 368 ntBASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 AC233728.2-201ENST00000425348 757 ntBASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 RPS7P2-201ENST00000435134 607 ntBASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 AC234064.1-201ENST00000436312 247 ntBASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 AC104073.1-201ENST00000451988 151 ntBASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 AC093801.2-201ENST00000503966 1050 ntBASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 HMGB1P22-201ENST00000505315 124 ntBASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 AC091860.1-201ENST00000505723 432 ntBASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 AC034105.3-201ENST00000565294 442 ntBASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 SNORD39.3-201ENST00000584451 71 ntBASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 AL009028.1-201ENST00000604895 802 ntBASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 AC120053.1-201ENST00000607706 736 ntBASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 VN1R7P-201ENST00000619242 903 ntBASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 AC022509.4-201ENST00000621404 572 ntBASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 AC068620.4-201ENST00000636730 1182 ntBASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
CCDC65Q8IXS2 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 SNORA63.3-201ENST00000362682 132 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 SNORA9.2-201ENST00000365361 133 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 SSXP10-201ENST00000402595 565 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 AL591034.1-201ENST00000407447 340 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 RNA5SP56-201ENST00000410277 118 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 RNU4-65P-201ENST00000410473 140 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 AL024507.1-201ENST00000412741 274 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 AC022018.1-201ENST00000430685 241 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 OR6K1P-201ENST00000456766 971 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 RPL21P41-201ENST00000459863 264 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 AP001992.1-205ENST00000462248 379 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 AC104472.2-201ENST00000469035 601 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 AC015908.1-201ENST00000478739 476 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 AP004217.1-201ENST00000480579 346 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 AC092902.1-201ENST00000486999 259 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 NAMPTP2-201ENST00000505629 1115 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 AC118282.2-201ENST00000508739 374 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 RNA5SP468-201ENST00000516782 93 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 RN7SKP57-201ENST00000517248 293 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 FAM60DP-201ENST00000524174 632 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 OR4A45P-201ENST00000529954 901 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 AADACP1-206ENST00000561502 1193 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 AC107954.1-201ENST00000565906 727 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 AC074051.3-201ENST00000570238 358 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 AC006116.7-201ENST00000590141 756 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 AC015871.2-201ENST00000603605 948 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 RPAP2P1-201ENST00000603626 1168 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 AL590282.1-201ENST00000610379 1136 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 AL442067.2-201ENST00000614033 363 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC65Q8IXS2 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms