Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 RNU5F-6P-201ENST00000362979 116 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 RNU6-501P-201ENST00000364072 100 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 RNA5SP42-201ENST00000364278 115 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 U3.15-201ENST00000365398 212 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 OR5H15-201ENST00000383696 930 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 Y_RNA.559-201ENST00000384686 107 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 RNA5SP424-201ENST00000390988 115 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 RPS26P8-201ENST00000393490 348 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 DEFB108C-201ENST00000400154 252 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 SSXP10-201ENST00000402595 565 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 HMGB1P17-201ENST00000403495 628 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 Y_RNA.599-201ENST00000410489 109 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 HMGB3P20-201ENST00000417997 600 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 AC006989.1-201ENST00000427212 131 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 AL512649.1-201ENST00000428997 581 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 AC068287.1-201ENST00000430283 295 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 MTND1P28-201ENST00000435623 950 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 AL031667.1-201ENST00000440222 725 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 SAGE4P-201ENST00000442271 3381 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 COX6CP2-201ENST00000444980 225 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 ELOCP30-201ENST00000447108 299 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 AC005297.2-201ENST00000450430 606 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 RPS29P33-201ENST00000456717 146 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 RPL31P50-201ENST00000471002 296 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 AC079140.3-201ENST00000511111 550 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 AC010625.1-201ENST00000511296 403 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 NDUFB4P9-201ENST00000511646 388 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 ARL2BPP6-201ENST00000512757 439 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 FTH1P9-201ENST00000513251 355 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 AL139174.1-201ENST00000531489 886 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 AC013828.2-201ENST00000532487 235 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 CENPUP2-201ENST00000555897 1186 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 MIR5096-201ENST00000583713 70 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 MIR3611-201ENST00000584484 83 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 OR4G1P-201ENST00000588632 938 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 AP000403.1-201ENST00000603349 851 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 AC007566.2-201ENST00000603642 413 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 AC128687.1-201ENST00000605304 619 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 RNU6-88P-201ENST00000606801 100 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 AC004492.1-201ENST00000607036 742 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 AP000254.1-201ENST00000609934 520 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 AC010678.1-201ENST00000614118 713 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 AC006065.5-201ENST00000623427 349 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 MTCO1P23-201ENST00000415223 1526 ntBASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
LRRTM1Q86UE6 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LRRTM1Q86UE6 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
LRRTM1Q86UE6 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.22□□□□□ -1.89
LRRTM1Q86UE6 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.22□□□□□ -1.89
LRRTM1Q86UE6 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LRRTM1Q86UE6 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
LRRTM1Q86UE6 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.22□□□□□ -1.89
LRRTM1Q86UE6 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LRRTM1Q86UE6 RNA5SP97-201ENST00000365006 84 ntBASIC3.22□□□□□ -1.89
LRRTM1Q86UE6 U1.1-201ENST00000384101 164 ntBASIC3.22□□□□□ -1.89
LRRTM1Q86UE6 SNORA75-201ENST00000384158 137 ntBASIC3.22□□□□□ -1.89
LRRTM1Q86UE6 Y_RNA.505-201ENST00000384489 102 ntBASIC3.22□□□□□ -1.89
LRRTM1Q86UE6 SOD2P1-201ENST00000396543 562 ntBASIC3.22□□□□□ -1.89
LRRTM1Q86UE6 RPL31P1-201ENST00000398116 372 ntBASIC3.22□□□□□ -1.89
LRRTM1Q86UE6 AL136116.1-201ENST00000403591 381 ntBASIC3.22□□□□□ -1.89
LRRTM1Q86UE6 RN7SKP285-201ENST00000410137 318 ntBASIC3.22□□□□□ -1.89
LRRTM1Q86UE6 AC109780.2-201ENST00000413467 845 ntBASIC3.22□□□□□ -1.89
LRRTM1Q86UE6 RPL31P2-201ENST00000413849 377 ntBASIC3.22□□□□□ -1.89
LRRTM1Q86UE6 HMGB1P11-201ENST00000413899 637 ntBASIC3.22□□□□□ -1.89
LRRTM1Q86UE6 TPMTP2-201ENST00000414372 726 ntBASIC3.22□□□□□ -1.89
LRRTM1Q86UE6 AC083875.1-201ENST00000419509 405 ntBASIC3.22□□□□□ -1.89
LRRTM1Q86UE6 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.22□□□□□ -1.89
LRRTM1Q86UE6 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.22□□□□□ -1.89
LRRTM1Q86UE6 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.22□□□□□ -1.89
LRRTM1Q86UE6 USP9YP14-201ENST00000430663 563 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms