Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
VPS13BQ7Z7G8 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
VPS13BQ7Z7G8 MTAPP1-201ENST00000489154 819 ntBASIC1.29□□□□□ -2.2
VPS13BQ7Z7G8 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.29□□□□□ -2.2
VPS13BQ7Z7G8 AC004486.1-201ENST00000546846 233 ntBASIC1.29□□□□□ -2.2
VPS13BQ7Z7G8 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC1.29□□□□□ -2.2
VPS13BQ7Z7G8 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
VPS13BQ7Z7G8 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
VPS13BQ7Z7G8 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
VPS13BQ7Z7G8 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
VPS13BQ7Z7G8 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
VPS13BQ7Z7G8 Y_RNA.112-201ENST00000363250 102 ntBASIC1.29□□□□□ -2.2
VPS13BQ7Z7G8 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.29□□□□□ -2.2
VPS13BQ7Z7G8 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.29□□□□□ -2.2
VPS13BQ7Z7G8 RPL21P18-201ENST00000469899 480 ntBASIC1.29□□□□□ -2.2
VPS13BQ7Z7G8 AC017007.3-201ENST00000479865 435 ntBASIC1.29□□□□□ -2.2
VPS13BQ7Z7G8 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC1.29□□□□□ -2.2
VPS13BQ7Z7G8 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.29□□□□□ -2.2
VPS13BQ7Z7G8 Z99496.1-201ENST00000469424 1477 ntBASIC1.29□□□□□ -2.2
VPS13BQ7Z7G8 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
VPS13BQ7Z7G8 SNORA51.4-201ENST00000364993 124 ntBASIC1.29□□□□□ -2.2
VPS13BQ7Z7G8 AL356806.1-201ENST00000422524 916 ntBASIC1.29□□□□□ -2.2
VPS13BQ7Z7G8 GAPDHP27-201ENST00000447427 1020 ntBASIC1.29□□□□□ -2.2
VPS13BQ7Z7G8 AC006483.1-201ENST00000487308 313 ntBASIC1.29□□□□□ -2.2
VPS13BQ7Z7G8 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC1.29□□□□□ -2.2
VPS13BQ7Z7G8 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.29□□□□□ -2.2
VPS13BQ7Z7G8 VN1R79P-201ENST00000593540 513 ntBASIC1.29□□□□□ -2.2
VPS13BQ7Z7G8 FTX-214ENST00000638437 12267 ntTSL 5 BASIC1.28□□□□□ -2.2
VPS13BQ7Z7G8 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC1.28□□□□□ -2.2
VPS13BQ7Z7G8 AIMP1P1-201ENST00000418670 937 ntBASIC1.28□□□□□ -2.2
VPS13BQ7Z7G8 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
VPS13BQ7Z7G8 MOB1AP2-201ENST00000446060 614 ntBASIC1.28□□□□□ -2.2
VPS13BQ7Z7G8 AC055855.1-201ENST00000489563 579 ntBASIC1.28□□□□□ -2.2
VPS13BQ7Z7G8 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC1.28□□□□□ -2.2
VPS13BQ7Z7G8 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.28□□□□□ -2.2
VPS13BQ7Z7G8 AC004520.1-201ENST00000608362 1413 ntBASIC1.28□□□□□ -2.2
VPS13BQ7Z7G8 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
VPS13BQ7Z7G8 MIR378A-201ENST00000362177 66 ntBASIC1.28□□□□□ -2.2
VPS13BQ7Z7G8 RNA5SP190-201ENST00000365222 118 ntBASIC1.28□□□□□ -2.2
VPS13BQ7Z7G8 RNU1-138P-201ENST00000384093 164 ntBASIC1.28□□□□□ -2.2
VPS13BQ7Z7G8 SNORA40.18-201ENST00000391200 128 ntBASIC1.28□□□□□ -2.2
VPS13BQ7Z7G8 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.28□□□□□ -2.2
VPS13BQ7Z7G8 RNA5SP239-201ENST00000410218 129 ntBASIC1.28□□□□□ -2.2
VPS13BQ7Z7G8 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.28□□□□□ -2.2
VPS13BQ7Z7G8 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.28□□□□□ -2.2
VPS13BQ7Z7G8 AC034244.1-201ENST00000507687 207 ntBASIC1.28□□□□□ -2.2
VPS13BQ7Z7G8 RPS27AP18-201ENST00000515536 459 ntBASIC1.28□□□□□ -2.2
VPS13BQ7Z7G8 AP001542.2-201ENST00000593141 364 ntBASIC1.28□□□□□ -2.2
VPS13BQ7Z7G8 AC073387.2-201ENST00000604797 784 ntBASIC1.28□□□□□ -2.2
VPS13BQ7Z7G8 RMST_2.1-201ENST00000617263 136 ntBASIC1.28□□□□□ -2.2
VPS13BQ7Z7G8 AC026241.1-201ENST00000517873 2142 ntBASIC1.28□□□□□ -2.2
VPS13BQ7Z7G8 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC1.28□□□□□ -2.2
VPS13BQ7Z7G8 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.28□□□□□ -2.2
VPS13BQ7Z7G8 AC027514.1-201ENST00000588561 1603 ntBASIC1.28□□□□□ -2.2
VPS13BQ7Z7G8 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.28□□□□□ -2.21
VPS13BQ7Z7G8 LAMTOR5P1-201ENST00000444290 270 ntBASIC1.28□□□□□ -2.21
VPS13BQ7Z7G8 AC107015.1-201ENST00000466902 747 ntBASIC1.28□□□□□ -2.21
VPS13BQ7Z7G8 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.28□□□□□ -2.21
VPS13BQ7Z7G8 AC107918.3-201ENST00000533272 382 ntBASIC1.28□□□□□ -2.21
VPS13BQ7Z7G8 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.28□□□□□ -2.21
VPS13BQ7Z7G8 ELOCP31-201ENST00000540463 467 ntBASIC1.28□□□□□ -2.21
VPS13BQ7Z7G8 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC1.28□□□□□ -2.21
VPS13BQ7Z7G8 MTCO3P13-201ENST00000577757 781 ntBASIC1.28□□□□□ -2.21
VPS13BQ7Z7G8 5S_rRNA.12-201ENST00000617631 107 ntBASIC1.28□□□□□ -2.21
VPS13BQ7Z7G8 AP006248.2-201ENST00000623309 592 ntBASIC1.28□□□□□ -2.21
VPS13BQ7Z7G8 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC1.28□□□□□ -2.21
VPS13BQ7Z7G8 MAPK10-373ENST00000641983 6772 ntBASIC1.28□□□□□ -2.21
VPS13BQ7Z7G8 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
VPS13BQ7Z7G8 MAPK10-266ENST00000641066 6555 ntBASIC1.28□□□□□ -2.21
VPS13BQ7Z7G8 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 RPL21P75-201ENST00000396599 483 ntBASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 RPL21P1-201ENST00000399532 476 ntBASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 RPL21P28-201ENST00000401418 483 ntBASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 AL592114.1-201ENST00000403842 483 ntBASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 RPL21P16-201ENST00000495531 483 ntBASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 AC060766.3-201ENST00000591442 263 ntBASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 AC020895.1-201ENST00000595362 272 ntBASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 RWDD4P2-201ENST00000426392 563 ntBASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 AC093151.1-201ENST00000427711 313 ntBASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 USP9YP8-201ENST00000441913 500 ntBASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 SNORD13-201ENST00000459299 104 ntBASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 RWDD4P1-201ENST00000488019 565 ntBASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 AC012119.1-201ENST00000603184 222 ntBASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 AL445437.1-201ENST00000623157 3087 ntBASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 RNU2-68P-201ENST00000410878 191 ntBASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 SDR42E1P3-201ENST00000438345 502 ntBASIC1.27□□□□□ -2.21
VPS13BQ7Z7G8 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms