Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 RNU6-74P-201ENST00000384235 107 ntBASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 U3.29-201ENST00000391296 212 ntBASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 RPS20P15-201ENST00000412792 311 ntBASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 RPL12P46-201ENST00000436610 195 ntBASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 Z95327.1-201ENST00000446082 482 ntBASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 NANOGP10-201ENST00000453325 895 ntBASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 RNU7-63P-201ENST00000459054 62 ntBASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 AC090686.1-201ENST00000481577 749 ntBASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 AC091868.1-201ENST00000508746 304 ntBASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 FGF7P4-201ENST00000509595 295 ntBASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 AC021146.1-201ENST00000511202 716 ntBASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 PANCR-202ENST00000513690 448 ntTSL 2 BASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 RPL23AP53-201ENST00000521854 457 ntBASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 COX6CP3-201ENST00000580869 223 ntBASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 AC130324.3-201ENST00000614165 542 ntBASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 AC007742.2-201ENST00000618226 398 ntBASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 AC002550.2-201ENST00000621246 394 ntBASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 NXPH1-205ENST00000602349 1953 ntBASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RUFY4Q6ZNE9 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 AC107068.1-201ENST00000563286 4218 ntBASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 RPL32P3-201ENST00000359025 275 ntBASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 RNU6-223P-201ENST00000362830 107 ntBASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 SNORA70.2-201ENST00000364506 135 ntBASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 AC068050.1-201ENST00000394891 380 ntBASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 RPL18P10-201ENST00000425606 538 ntBASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 AC008065.1-201ENST00000428525 348 ntBASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 AC016831.4-201ENST00000438302 307 ntBASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 CBWD4P-201ENST00000445695 655 ntBASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 AC104651.2-201ENST00000447549 528 ntBASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 AL356981.1-201ENST00000454879 684 ntBASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 ENPP7P9-201ENST00000514456 627 ntBASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 SCARNA24.1-201ENST00000516465 137 ntBASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 MIR4715-201ENST00000584117 79 ntBASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 RNF138P2-201ENST00000603490 592 ntBASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 AC004908.2-201ENST00000609090 574 ntBASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 AC245517.5-201ENST00000611529 162 ntBASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RUFY4Q6ZNE9 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 DHX40P1-201ENST00000588725 1412 ntBASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 RPS4XP5-202ENST00000449995 1334 ntBASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 Y_RNA.255-201ENST00000364581 97 ntBASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 SNORD51-201ENST00000384320 80 ntBASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 MIR19A-201ENST00000384878 82 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 253.2 ms