Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RFWD3Q6PCD5 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 RNU6-492P-201ENST00000363035 104 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 RNU6-560P-201ENST00000364007 108 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 RNU4-28P-201ENST00000364739 141 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 SNORD116.1-201ENST00000365628 92 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 SUGT1P1-201ENST00000379514 476 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 AL583834.1-201ENST00000406943 343 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 HMGB3P23-201ENST00000414981 585 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 HIGD1AP15-201ENST00000416198 280 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 RPL22P18-201ENST00000417197 377 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 BOLA3P4-201ENST00000418151 400 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 HMGB1P49-201ENST00000418882 569 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 MRPS36P1-201ENST00000421291 307 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 XKRYP1-201ENST00000423438 492 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 RPL7P44-201ENST00000424827 742 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 XKRYP2-201ENST00000432915 492 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 AC241584.1-201ENST00000438469 1241 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 ELOCP13-201ENST00000443934 329 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 PTENP1-201ENST00000447117 1215 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 RFC5P1-201ENST00000454419 874 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 AC108734.3-201ENST00000481241 1165 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 RNU1-143P-201ENST00000516296 146 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 SCARNA20.6-201ENST00000517251 106 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 AC010198.2-201ENST00000550612 259 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 MTCYBP27-201ENST00000555160 670 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 AL390838.2-201ENST00000602394 274 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 AC113368.1-201ENST00000603736 382 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 AC073657.2-201ENST00000605661 303 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 AC011816.2-201ENST00000607089 556 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 U1.23-201ENST00000610293 146 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 RNU1-68P-201ENST00000615382 146 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 U1.39-201ENST00000621562 146 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 AC091953.5-201ENST00000622919 233 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 AC110801.1-201ENST00000623590 212 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 SNORA50A-202ENST00000629536 136 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 AC026634.1-201ENST00000634369 198 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 MTND5P28-201ENST00000438005 1594 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 ELL2P4-201ENST00000446870 1376 ntBASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RFWD3Q6PCD5 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 AC011978.2-201ENST00000569835 2054 ntBASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 RNA5SP295-201ENST00000362655 121 ntBASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 RNA5SP383-201ENST00000362934 120 ntBASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 RNU6-251P-201ENST00000363235 104 ntBASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 RPS3AP9-201ENST00000417027 792 ntBASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 ELOCP9-201ENST00000418624 239 ntBASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 AC115115.1-201ENST00000449927 248 ntBASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 AC087879.1-201ENST00000474343 374 ntBASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 AC110794.1-201ENST00000505816 425 ntBASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 AC118282.1-201ENST00000506408 765 ntBASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 RN7SKP287-201ENST00000516546 266 ntBASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 ARL2BPP5-201ENST00000523141 481 ntBASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 MTCO2P15-201ENST00000532655 656 ntBASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 GTF2IP8-201ENST00000560687 584 ntBASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 MTCYBP28-201ENST00000566728 1132 ntBASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 MIR4504-201ENST00000577413 92 ntBASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 AC022662.1-201ENST00000580252 331 ntBASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 BNIP3P26-201ENST00000600827 554 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms