Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.1□□□□□ -1.91
NIPAL3Q6P499 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.1□□□□□ -1.91
NIPAL3Q6P499 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NIPAL3Q6P499 AC032011.1-201ENST00000611703 1549 ntBASIC3.1□□□□□ -1.91
NIPAL3Q6P499 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
NIPAL3Q6P499 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NIPAL3Q6P499 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
NIPAL3Q6P499 Y_RNA.472-201ENST00000384322 102 ntBASIC3.1□□□□□ -1.91
NIPAL3Q6P499 MIR620-201ENST00000385232 95 ntBASIC3.1□□□□□ -1.91
NIPAL3Q6P499 AL356131.1-201ENST00000405826 414 ntBASIC3.1□□□□□ -1.91
NIPAL3Q6P499 BX842559.1-201ENST00000419615 532 ntBASIC3.1□□□□□ -1.91
NIPAL3Q6P499 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.1□□□□□ -1.91
NIPAL3Q6P499 BEND7P1-201ENST00000422058 457 ntBASIC3.1□□□□□ -1.91
NIPAL3Q6P499 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NIPAL3Q6P499 AC007742.1-201ENST00000425789 329 ntBASIC3.1□□□□□ -1.91
NIPAL3Q6P499 AC091286.1-201ENST00000431233 461 ntBASIC3.1□□□□□ -1.91
NIPAL3Q6P499 ELOCP26-201ENST00000436067 329 ntBASIC3.1□□□□□ -1.91
NIPAL3Q6P499 MTND4P6-201ENST00000438297 472 ntBASIC3.1□□□□□ -1.91
NIPAL3Q6P499 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.1□□□□□ -1.91
NIPAL3Q6P499 RPL21P23-201ENST00000446654 460 ntBASIC3.1□□□□□ -1.91
NIPAL3Q6P499 HMGB3P8-201ENST00000449709 577 ntBASIC3.1□□□□□ -1.91
NIPAL3Q6P499 TRGVB-201ENST00000453257 471 ntBASIC3.1□□□□□ -1.91
NIPAL3Q6P499 AC091564.1-201ENST00000464563 479 ntBASIC3.1□□□□□ -1.91
NIPAL3Q6P499 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NIPAL3Q6P499 HMGN2P13-201ENST00000476476 274 ntBASIC3.1□□□□□ -1.91
NIPAL3Q6P499 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.1□□□□□ -1.91
NIPAL3Q6P499 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.1□□□□□ -1.91
NIPAL3Q6P499 RNU6-583P-201ENST00000516012 92 ntBASIC3.1□□□□□ -1.91
NIPAL3Q6P499 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.1□□□□□ -1.91
NIPAL3Q6P499 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.1□□□□□ -1.91
NIPAL3Q6P499 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.1□□□□□ -1.91
NIPAL3Q6P499 MIR3158-1-201ENST00000583596 81 ntBASIC3.1□□□□□ -1.91
NIPAL3Q6P499 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.1□□□□□ -1.91
NIPAL3Q6P499 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.1□□□□□ -1.91
NIPAL3Q6P499 DUXAP11-201ENST00000603858 526 ntBASIC3.1□□□□□ -1.91
NIPAL3Q6P499 AL365400.2-201ENST00000605604 902 ntBASIC3.1□□□□□ -1.91
NIPAL3Q6P499 TUG1_1.1-201ENST00000610654 145 ntBASIC3.1□□□□□ -1.91
NIPAL3Q6P499 AC092628.2-201ENST00000622492 339 ntBASIC3.1□□□□□ -1.91
NIPAL3Q6P499 LINC02211-204ENST00000642024 1070 ntBASIC3.1□□□□□ -1.91
NIPAL3Q6P499 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.1□□□□□ -1.91
NIPAL3Q6P499 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NIPAL3Q6P499 AL356473.1-201ENST00000406203 1408 ntBASIC3.1□□□□□ -1.91
NIPAL3Q6P499 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.1□□□□□ -1.91
NIPAL3Q6P499 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NIPAL3Q6P499 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
NIPAL3Q6P499 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NIPAL3Q6P499 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NIPAL3Q6P499 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
NIPAL3Q6P499 NACA3P-201ENST00000359690 648 ntBASIC3.09□□□□□ -1.91
NIPAL3Q6P499 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NIPAL3Q6P499 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.09□□□□□ -1.91
NIPAL3Q6P499 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.09□□□□□ -1.91
NIPAL3Q6P499 Y_RNA.408-201ENST00000383987 102 ntBASIC3.09□□□□□ -1.91
NIPAL3Q6P499 RNU6-1176P-201ENST00000390955 107 ntBASIC3.09□□□□□ -1.91
NIPAL3Q6P499 ATP5F1P3-201ENST00000397213 657 ntBASIC3.09□□□□□ -1.91
NIPAL3Q6P499 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.09□□□□□ -1.91
NIPAL3Q6P499 AC126124.2-201ENST00000413542 321 ntBASIC3.09□□□□□ -1.91
NIPAL3Q6P499 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.09□□□□□ -1.91
NIPAL3Q6P499 RPS15AP6-201ENST00000420703 385 ntBASIC3.09□□□□□ -1.91
NIPAL3Q6P499 AC233728.2-201ENST00000425348 757 ntBASIC3.09□□□□□ -1.91
NIPAL3Q6P499 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.09□□□□□ -1.91
NIPAL3Q6P499 AL050321.1-201ENST00000432363 400 ntBASIC3.09□□□□□ -1.91
NIPAL3Q6P499 HMGN2P31-201ENST00000432430 273 ntBASIC3.09□□□□□ -1.91
NIPAL3Q6P499 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.09□□□□□ -1.91
NIPAL3Q6P499 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.09□□□□□ -1.91
NIPAL3Q6P499 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.09□□□□□ -1.91
NIPAL3Q6P499 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.09□□□□□ -1.91
NIPAL3Q6P499 OR6K5P-201ENST00000447050 945 ntBASIC3.09□□□□□ -1.91
NIPAL3Q6P499 AC008264.1-201ENST00000447612 367 ntBASIC3.09□□□□□ -1.91
NIPAL3Q6P499 MTATP6P14-201ENST00000455189 673 ntBASIC3.09□□□□□ -1.91
NIPAL3Q6P499 RNA5SP310-201ENST00000459084 116 ntBASIC3.09□□□□□ -1.91
NIPAL3Q6P499 AC025518.1-201ENST00000479856 347 ntBASIC3.09□□□□□ -1.91
NIPAL3Q6P499 MTCYBP17-201ENST00000503579 789 ntBASIC3.09□□□□□ -1.91
NIPAL3Q6P499 PRELID3BP6-201ENST00000503839 571 ntBASIC3.09□□□□□ -1.91
NIPAL3Q6P499 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.09□□□□□ -1.91
NIPAL3Q6P499 SNORA67.7-201ENST00000516664 135 ntBASIC3.09□□□□□ -1.91
NIPAL3Q6P499 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.09□□□□□ -1.91
NIPAL3Q6P499 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.09□□□□□ -1.91
NIPAL3Q6P499 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
NIPAL3Q6P499 OR5B10P-201ENST00000532869 642 ntBASIC3.09□□□□□ -1.91
NIPAL3Q6P499 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.09□□□□□ -1.91
NIPAL3Q6P499 TMF1P1-201ENST00000576058 373 ntBASIC3.09□□□□□ -1.91
NIPAL3Q6P499 AC067852.3-201ENST00000589177 561 ntBASIC3.09□□□□□ -1.91
NIPAL3Q6P499 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.09□□□□□ -1.91
NIPAL3Q6P499 AC245389.1-201ENST00000605141 529 ntBASIC3.09□□□□□ -1.91
NIPAL3Q6P499 U3.45-201ENST00000607547 219 ntBASIC3.09□□□□□ -1.91
NIPAL3Q6P499 AL121895.2-201ENST00000619558 447 ntBASIC3.09□□□□□ -1.91
NIPAL3Q6P499 AC006111.3-201ENST00000622137 383 ntBASIC3.09□□□□□ -1.91
NIPAL3Q6P499 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.09□□□□□ -1.91
NIPAL3Q6P499 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
NIPAL3Q6P499 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
NIPAL3Q6P499 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
NIPAL3Q6P499 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.09□□□□□ -1.92
NIPAL3Q6P499 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.08□□□□□ -1.92
NIPAL3Q6P499 TAB3P1-202ENST00000452645 1634 ntBASIC3.08□□□□□ -1.92
NIPAL3Q6P499 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.08□□□□□ -1.92
NIPAL3Q6P499 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.08□□□□□ -1.92
NIPAL3Q6P499 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NIPAL3Q6P499 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
NIPAL3Q6P499 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms