Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC1.4□□□□□ -2.18
VPS13DQ5THJ4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC1.4□□□□□ -2.18
VPS13DQ5THJ4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC1.4□□□□□ -2.18
VPS13DQ5THJ4 SNRPGP9-201ENST00000456025 225 ntBASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 AC008083.2-201ENST00000546707 476 ntBASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 AC010297.1-201ENST00000623948 149 ntBASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 MIR96-201ENST00000362288 78 ntBASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 SNORA51.4-201ENST00000364993 124 ntBASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 AC009831.4-201ENST00000620744 325 ntBASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 SNORA50A-202ENST00000629536 136 ntBASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 RNA5SP190-201ENST00000365222 118 ntBASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 LUZP4P1-201ENST00000415420 344 ntBASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 RPL7P54-201ENST00000438336 674 ntBASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 RPL23AP58-201ENST00000440453 469 ntBASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 RN7SL283P-201ENST00000489055 303 ntBASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 MIR3683-201ENST00000580847 82 ntBASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
VPS13DQ5THJ4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 MTND4P35-201ENST00000604257 1375 ntBASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 RPL23AP42-201ENST00000471152 471 ntBASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 RN7SKP282-201ENST00000516824 299 ntBASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 HSP90AA5P-201ENST00000438353 2192 ntBASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 ELOCP13-201ENST00000443934 329 ntBASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 RPL38P4-201ENST00000502376 214 ntBASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 AC093331.1-201ENST00000521474 169 ntBASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 AC009501.3-201ENST00000605001 1352 ntBASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 TRIAP1P1-201ENST00000427062 225 ntBASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 PTGES3P5-201ENST00000455109 434 ntBASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 AC087385.1-201ENST00000475062 312 ntBASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 AC091152.2-201ENST00000591628 2569 ntBASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 AC092447.7-201ENST00000422212 1621 ntBASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
VPS13DQ5THJ4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 RNU6-14P-201ENST00000384630 106 ntBASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 AP1B1P2-201ENST00000416196 106 ntBASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 RNU6ATAC39P-201ENST00000516309 149 ntBASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 AC006378.2-201ENST00000623178 2476 ntBASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 AC022336.2-201ENST00000568966 2538 ntBASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 DEFA7P-201ENST00000382676 285 ntBASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 AC234781.4-201ENST00000419384 244 ntBASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 YWHAZP7-201ENST00000436906 631 ntBASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 AC055855.1-201ENST00000489563 579 ntBASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 AC108078.2-201ENST00000510750 236 ntBASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 RNA5SP480-201ENST00000516840 109 ntBASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 MIR4506-201ENST00000584693 77 ntBASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 SNRPGP19-201ENST00000603826 189 ntBASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 AC002543.1-201ENST00000299783 1954 ntBASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 AF127577.6-201ENST00000623352 2191 ntBASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 Y_RNA.269-201ENST00000364685 89 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms