Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SNAPC4Q5SXM2 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SNAPC4Q5SXM2 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.63□□□□□ -1.83
SNAPC4Q5SXM2 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SNAPC4Q5SXM2 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SNAPC4Q5SXM2 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.62□□□□□ -1.83
SNAPC4Q5SXM2 RNY1P10-201ENST00000363268 113 ntBASIC3.62□□□□□ -1.83
SNAPC4Q5SXM2 SNORA25.9-201ENST00000365087 128 ntBASIC3.62□□□□□ -1.83
SNAPC4Q5SXM2 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SNAPC4Q5SXM2 MTCYBP7-201ENST00000419540 1134 ntBASIC3.62□□□□□ -1.83
SNAPC4Q5SXM2 AC012498.1-201ENST00000424037 437 ntBASIC3.62□□□□□ -1.83
SNAPC4Q5SXM2 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.62□□□□□ -1.83
SNAPC4Q5SXM2 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.62□□□□□ -1.83
SNAPC4Q5SXM2 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.62□□□□□ -1.83
SNAPC4Q5SXM2 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.62□□□□□ -1.83
SNAPC4Q5SXM2 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SNAPC4Q5SXM2 AC010733.2-201ENST00000589496 5702 ntBASIC3.62□□□□□ -1.83
SNAPC4Q5SXM2 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
SNAPC4Q5SXM2 AL109809.4-201ENST00000603520 2185 ntBASIC3.62□□□□□ -1.83
SNAPC4Q5SXM2 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
SNAPC4Q5SXM2 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.62□□□□□ -1.83
SNAPC4Q5SXM2 AC095050.2-201ENST00000510748 1458 ntBASIC3.62□□□□□ -1.83
SNAPC4Q5SXM2 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.61□□□□□ -1.83
SNAPC4Q5SXM2 NDUFB4P5-201ENST00000415445 361 ntBASIC3.61□□□□□ -1.83
SNAPC4Q5SXM2 AC093151.1-201ENST00000427711 313 ntBASIC3.61□□□□□ -1.83
SNAPC4Q5SXM2 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.61□□□□□ -1.83
SNAPC4Q5SXM2 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.61□□□□□ -1.83
SNAPC4Q5SXM2 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.61□□□□□ -1.83
SNAPC4Q5SXM2 CALM1P2-201ENST00000452941 448 ntBASIC3.61□□□□□ -1.83
SNAPC4Q5SXM2 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.61□□□□□ -1.83
SNAPC4Q5SXM2 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SNAPC4Q5SXM2 RNA5SP480-201ENST00000516840 109 ntBASIC3.61□□□□□ -1.83
SNAPC4Q5SXM2 AP003467.2-201ENST00000520175 319 ntBASIC3.61□□□□□ -1.83
SNAPC4Q5SXM2 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.61□□□□□ -1.83
SNAPC4Q5SXM2 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.61□□□□□ -1.83
SNAPC4Q5SXM2 AC105137.2-201ENST00000569073 466 ntBASIC3.61□□□□□ -1.83
SNAPC4Q5SXM2 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.61□□□□□ -1.83
SNAPC4Q5SXM2 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.61□□□□□ -1.83
SNAPC4Q5SXM2 RPP40P2-201ENST00000603596 712 ntBASIC3.61□□□□□ -1.83
SNAPC4Q5SXM2 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.61□□□□□ -1.83
SNAPC4Q5SXM2 AL356266.1-201ENST00000623311 483 ntBASIC3.61□□□□□ -1.83
SNAPC4Q5SXM2 MFSD8-245ENST00000641743 948 ntBASIC3.61□□□□□ -1.83
SNAPC4Q5SXM2 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SNAPC4Q5SXM2 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SNAPC4Q5SXM2 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
SNAPC4Q5SXM2 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.61□□□□□ -1.83
SNAPC4Q5SXM2 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SNAPC4Q5SXM2 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 AL139156.1-201ENST00000412785 841 ntBASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 AC010627.1-201ENST00000503819 1294 ntBASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 AC084373.1-201ENST00000603311 235 ntBASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 AL391813.2-201ENST00000609113 322 ntBASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 AL133370.2-201ENST00000619934 439 ntBASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 LRRC77P-213ENST00000637727 880 ntBASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 FRG1BP-201ENST00000278882 761 ntBASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 RPS27P27-201ENST00000498779 255 ntBASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 RNA5SP200-201ENST00000516360 103 ntBASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 AC022790.1-201ENST00000522872 204 ntBASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 CBX3P5-201ENST00000552017 521 ntBASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 AL845331.3-202ENST00000562856 261 ntBASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 MIR4458-201ENST00000578872 75 ntBASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 AL160394.1-201ENST00000624765 724 ntBASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.6□□□□□ -1.83
SNAPC4Q5SXM2 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.59□□□□□ -1.83
SNAPC4Q5SXM2 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC3.59□□□□□ -1.83
SNAPC4Q5SXM2 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
SNAPC4Q5SXM2 XIAPP3-201ENST00000312918 795 ntBASIC3.59□□□□□ -1.84
SNAPC4Q5SXM2 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
SNAPC4Q5SXM2 AC009965.2-201ENST00000425328 970 ntBASIC3.59□□□□□ -1.84
SNAPC4Q5SXM2 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.59□□□□□ -1.84
SNAPC4Q5SXM2 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.59□□□□□ -1.84
SNAPC4Q5SXM2 GSTA11P-201ENST00000452866 669 ntBASIC3.59□□□□□ -1.84
SNAPC4Q5SXM2 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.59□□□□□ -1.84
SNAPC4Q5SXM2 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.59□□□□□ -1.84
SNAPC4Q5SXM2 RN7SKP96-201ENST00000516948 297 ntBASIC3.59□□□□□ -1.84
SNAPC4Q5SXM2 HMGB1P41-201ENST00000520234 440 ntBASIC3.59□□□□□ -1.84
SNAPC4Q5SXM2 VN1R79P-201ENST00000593540 513 ntBASIC3.59□□□□□ -1.84
SNAPC4Q5SXM2 AC128687.1-201ENST00000605304 619 ntBASIC3.59□□□□□ -1.84
SNAPC4Q5SXM2 AC002076.2-201ENST00000617362 122 ntBASIC3.59□□□□□ -1.84
SNAPC4Q5SXM2 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.58□□□□□ -1.84
SNAPC4Q5SXM2 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.58□□□□□ -1.84
SNAPC4Q5SXM2 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.58□□□□□ -1.84
SNAPC4Q5SXM2 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SNAPC4Q5SXM2 MIR337-201ENST00000362281 93 ntBASIC3.58□□□□□ -1.84
SNAPC4Q5SXM2 HMGB1P11-201ENST00000413899 637 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms