Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 RPS15AP12-201ENST00000419498 388 ntBASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 USP9YP36-201ENST00000424581 829 ntBASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 NANOGNBP1-201ENST00000448444 480 ntBASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 AC007967.1-201ENST00000455422 1159 ntBASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 SCARNA10-201ENST00000459255 330 ntBASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 RPS3AP50-201ENST00000487064 803 ntBASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 RNU6-506P-201ENST00000516553 94 ntBASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 RNA5SP360-201ENST00000516555 118 ntBASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 AC016957.1-201ENST00000534895 309 ntBASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 AC087883.1-201ENST00000551882 391 ntBASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 AL133153.1-201ENST00000557756 303 ntBASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 AC114781.5-201ENST00000615297 108 ntBASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 AC068137.3-201ENST00000639191 341 ntBASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 AC073869.6-201ENST00000640656 341 ntBASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC144BQ3MJ40 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CCDC144BQ3MJ40 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
CCDC144BQ3MJ40 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CCDC144BQ3MJ40 AC092435.4-201ENST00000623012 4159 ntBASIC5.21□□□□□ -1.57
CCDC144BQ3MJ40 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CCDC144BQ3MJ40 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 RNU6-517P-201ENST00000384362 110 ntBASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 RPL7P60-201ENST00000397636 735 ntBASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 RNU6-195P-201ENST00000411352 109 ntBASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 MTND3P17-201ENST00000416968 344 ntBASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 RPL21P89-201ENST00000444021 467 ntBASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 NDUFS5P3-201ENST00000450668 321 ntBASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 RPL36AP13-201ENST00000457490 317 ntBASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 RPL7AP28-201ENST00000464513 571 ntBASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 AC025164.1-201ENST00000496249 478 ntBASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 AC135721.1-201ENST00000497954 479 ntBASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 HMGB1P29-201ENST00000505659 499 ntBASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 STMN1P2-201ENST00000508435 439 ntBASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 AC026402.1-201ENST00000513642 170 ntBASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 DEFB108D-201ENST00000527787 222 ntBASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 MED28P5-201ENST00000528254 438 ntBASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 AC074050.1-201ENST00000563247 211 ntBASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 AC136619.2-201ENST00000563361 631 ntBASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 AC007224.1-201ENST00000564410 144 ntBASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 AL391813.2-201ENST00000609113 322 ntBASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 AL732618.1-201ENST00000623251 301 ntBASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC144BQ3MJ40 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 OR51H2P-202ENST00000641424 3046 ntBASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 RNY3P13-201ENST00000365542 102 ntBASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 SNORA20.2-201ENST00000383922 131 ntBASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 AL109755.1-201ENST00000401791 649 ntBASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 ISCA1P1-201ENST00000426679 387 ntBASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 AC133104.1-201ENST00000429100 218 ntBASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 RPS29P17-201ENST00000430795 166 ntBASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 AC104850.1-201ENST00000435940 476 ntBASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 RN7SL303P-201ENST00000469773 251 ntBASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 RPL9P6-201ENST00000492764 598 ntBASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 AC108078.1-201ENST00000508073 725 ntBASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 SNORA31.20-201ENST00000517111 133 ntBASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 AP000827.1-201ENST00000527814 258 ntBASIC5.2□□□□□ -1.58
CCDC144BQ3MJ40 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms