Protein–RNA interactions for Protein: Q06547

GABPB1, GA-binding protein subunit beta-1, humanhuman

Predicted RBP Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1Q06547 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
GABPB1Q06547 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
GABPB1Q06547 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
GABPB1Q06547 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
GABPB1Q06547 RPL21P75-201ENST00000396599 483 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 SNRPEP2-201ENST00000397592 279 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 RPL21P28-201ENST00000401418 483 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 AL592114.1-201ENST00000403842 483 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 AL451074.5-201ENST00000415894 435 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 MRPS36P1-201ENST00000421291 307 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
GABPB1Q06547 RPL7P44-201ENST00000424827 742 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
GABPB1Q06547 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.32□□□□□ -1.88
GABPB1Q06547 AC092427.1-201ENST00000439177 601 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
GABPB1Q06547 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
GABPB1Q06547 RPL39P6-201ENST00000448289 150 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 RFC5P1-201ENST00000454419 874 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 RPL21P39-201ENST00000463605 483 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 AC011979.1-201ENST00000472300 483 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
GABPB1Q06547 RPL21P93-201ENST00000480465 489 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 AC233702.1-201ENST00000482905 502 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 AC087190.1-201ENST00000484462 480 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 AC093591.1-201ENST00000491435 481 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 RPL21P129-201ENST00000491732 478 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 RPL21P16-201ENST00000495531 483 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 HSPD1P15-201ENST00000505573 1122 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.32□□□□□ -1.88
GABPB1Q06547 AC113347.3-201ENST00000509113 148 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.32□□□□□ -1.88
GABPB1Q06547 SNORA19.3-201ENST00000516165 130 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 RNU6-1225P-201ENST00000516336 65 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.32□□□□□ -1.88
GABPB1Q06547 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.32□□□□□ -1.88
GABPB1Q06547 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.32□□□□□ -1.88
GABPB1Q06547 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
GABPB1Q06547 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.32□□□□□ -1.88
GABPB1Q06547 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.32□□□□□ -1.88
GABPB1Q06547 AC004486.1-201ENST00000546846 233 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.32□□□□□ -1.88
GABPB1Q06547 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.32□□□□□ -1.88
GABPB1Q06547 AC136624.4-201ENST00000573044 370 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.32□□□□□ -1.88
GABPB1Q06547 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.32□□□□□ -1.88
GABPB1Q06547 AC006504.3-201ENST00000586818 523 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 AC005014.3-201ENST00000605985 190 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 AF129408.1-201ENST00000608767 431 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 AC120349.2-201ENST00000625002 298 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 MIR3653-201ENST00000625572 110 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.32□□□□□ -1.88
GABPB1Q06547 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.32□□□□□ -1.88
GABPB1Q06547 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.32□□□□□ -1.88
GABPB1Q06547 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
GABPB1Q06547 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
GABPB1Q06547 CDR1-202ENST00000625883 1485 ntBASIC3.31□□□□□ -1.88
GABPB1Q06547 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.31□□□□□ -1.88
GABPB1Q06547 SNRPEP3-201ENST00000338402 276 ntBASIC3.31□□□□□ -1.88
GABPB1Q06547 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
GABPB1Q06547 RNU5D-1-201ENST00000363299 116 ntBASIC3.31□□□□□ -1.88
GABPB1Q06547 SNORA14A-201ENST00000364773 135 ntBASIC3.31□□□□□ -1.88
GABPB1Q06547 RNU4-6P-201ENST00000410804 122 ntBASIC3.31□□□□□ -1.88
GABPB1Q06547 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.31□□□□□ -1.88
GABPB1Q06547 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.31□□□□□ -1.88
GABPB1Q06547 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
GABPB1Q06547 USP9YP36-201ENST00000424581 829 ntBASIC3.31□□□□□ -1.88
GABPB1Q06547 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.31□□□□□ -1.88
GABPB1Q06547 RPS29P6-201ENST00000438196 145 ntBASIC3.31□□□□□ -1.88
GABPB1Q06547 MTCYBP34-201ENST00000439552 670 ntBASIC3.31□□□□□ -1.88
GABPB1Q06547 RNF2P1-201ENST00000442955 1010 ntBASIC3.31□□□□□ -1.88
GABPB1Q06547 Z95327.1-201ENST00000446082 482 ntBASIC3.31□□□□□ -1.88
GABPB1Q06547 AC104472.2-201ENST00000469035 601 ntBASIC3.31□□□□□ -1.88
GABPB1Q06547 AC103987.1-201ENST00000473394 348 ntBASIC3.31□□□□□ -1.88
GABPB1Q06547 AC108734.3-201ENST00000481241 1165 ntBASIC3.31□□□□□ -1.88
GABPB1Q06547 AC110792.1-201ENST00000491826 472 ntBASIC3.31□□□□□ -1.88
GABPB1Q06547 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.31□□□□□ -1.88
GABPB1Q06547 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.31□□□□□ -1.88
GABPB1Q06547 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
GABPB1Q06547 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.31□□□□□ -1.88
GABPB1Q06547 RNU6-56P-201ENST00000516986 93 ntBASIC3.31□□□□□ -1.88
GABPB1Q06547 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.31□□□□□ -1.88
GABPB1Q06547 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.31□□□□□ -1.88
GABPB1Q06547 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.31□□□□□ -1.88
GABPB1Q06547 MIR3670-2-201ENST00000582974 65 ntBASIC3.31□□□□□ -1.88
GABPB1Q06547 MIR3670-1-201ENST00000584160 65 ntBASIC3.31□□□□□ -1.88
GABPB1Q06547 MIR3670-3-201ENST00000584855 65 ntBASIC3.31□□□□□ -1.88
GABPB1Q06547 AP001330.4-201ENST00000604350 154 ntBASIC3.31□□□□□ -1.88
GABPB1Q06547 uc_338.1-201ENST00000612113 180 ntBASIC3.31□□□□□ -1.88
GABPB1Q06547 MIR3670-4-201ENST00000612260 65 ntBASIC3.31□□□□□ -1.88
GABPB1Q06547 AC023158.2-201ENST00000614876 543 ntBASIC3.31□□□□□ -1.88
GABPB1Q06547 CYCSP41-201ENST00000616920 296 ntBASIC3.31□□□□□ -1.88
GABPB1Q06547 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.31□□□□□ -1.88
GABPB1Q06547 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.31□□□□□ -1.88
GABPB1Q06547 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.31□□□□□ -1.88
GABPB1Q06547 AP002907.1-201ENST00000606361 1430 ntBASIC3.3□□□□□ -1.88
GABPB1Q06547 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.3□□□□□ -1.88
GABPB1Q06547 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
GABPB1Q06547 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
GABPB1Q06547 OR5H2-201ENST00000355273 945 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms