Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC073530.2-201ENST00000623987 261 ntBASIC1.59□□□□□ -2.15
RPS28P62857 AC012442.3-202ENST00000636742 206 ntBASIC1.59□□□□□ -2.15
RPS28P62857 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
RPS28P62857 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC1.59□□□□□ -2.16
RPS28P62857 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC1.59□□□□□ -2.16
RPS28P62857 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
RPS28P62857 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.59□□□□□ -2.16
RPS28P62857 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
RPS28P62857 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
RPS28P62857 AC004520.1-201ENST00000608362 1413 ntBASIC1.58□□□□□ -2.16
RPS28P62857 CPD-202ENST00000543464 4007 ntTSL 2 BASIC1.58□□□□□ -2.16
RPS28P62857 FTLP6-201ENST00000355274 422 ntBASIC1.58□□□□□ -2.16
RPS28P62857 RNU1-91P-201ENST00000364746 163 ntBASIC1.58□□□□□ -2.16
RPS28P62857 RNU1-100P-201ENST00000365255 165 ntBASIC1.58□□□□□ -2.16
RPS28P62857 MIR138-2-201ENST00000384916 84 ntBASIC1.58□□□□□ -2.16
RPS28P62857 U8.14-201ENST00000390843 143 ntBASIC1.58□□□□□ -2.16
RPS28P62857 UBA52P6-201ENST00000399822 382 ntBASIC1.58□□□□□ -2.16
RPS28P62857 GSTA9P-201ENST00000406231 611 ntBASIC1.58□□□□□ -2.16
RPS28P62857 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
RPS28P62857 MIR1193-201ENST00000408109 78 ntBASIC1.58□□□□□ -2.16
RPS28P62857 RN7SKP158-201ENST00000410453 326 ntBASIC1.58□□□□□ -2.16
RPS28P62857 RNU6-1328P-201ENST00000410938 106 ntBASIC1.58□□□□□ -2.16
RPS28P62857 SPA17P1-201ENST00000416656 452 ntBASIC1.58□□□□□ -2.16
RPS28P62857 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.58□□□□□ -2.16
RPS28P62857 AC069213.2-201ENST00000420238 366 ntBASIC1.58□□□□□ -2.16
RPS28P62857 BX510359.3-201ENST00000422168 306 ntBASIC1.58□□□□□ -2.16
RPS28P62857 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.58□□□□□ -2.16
RPS28P62857 AC007559.1-201ENST00000428736 355 ntBASIC1.58□□□□□ -2.16
RPS28P62857 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC1.58□□□□□ -2.16
RPS28P62857 TAAR7P-201ENST00000436141 242 ntBASIC1.58□□□□□ -2.16
RPS28P62857 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
RPS28P62857 AL356121.1-201ENST00000442911 156 ntBASIC1.58□□□□□ -2.16
RPS28P62857 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.58□□□□□ -2.16
RPS28P62857 AL139135.2-201ENST00000445040 433 ntBASIC1.58□□□□□ -2.16
RPS28P62857 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.58□□□□□ -2.16
RPS28P62857 TRBV26-201ENST00000456572 344 ntBASIC1.58□□□□□ -2.16
RPS28P62857 OR2A1-AS1-202ENST00000467944 422 ntBASIC1.58□□□□□ -2.16
RPS28P62857 OR2AO1P-201ENST00000476497 403 ntBASIC1.58□□□□□ -2.16
RPS28P62857 RN7SL691P-201ENST00000494487 301 ntBASIC1.58□□□□□ -2.16
RPS28P62857 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.58□□□□□ -2.16
RPS28P62857 SNORA31.25-201ENST00000517242 134 ntBASIC1.58□□□□□ -2.16
RPS28P62857 AC113191.1-201ENST00000517759 403 ntBASIC1.58□□□□□ -2.16
RPS28P62857 AC123904.3-201ENST00000547218 814 ntBASIC1.58□□□□□ -2.16
RPS28P62857 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC1.58□□□□□ -2.16
RPS28P62857 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.58□□□□□ -2.16
RPS28P62857 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC1.58□□□□□ -2.16
RPS28P62857 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.58□□□□□ -2.16
RPS28P62857 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC1.58□□□□□ -2.16
RPS28P62857 MIR5092-201ENST00000583139 88 ntBASIC1.58□□□□□ -2.16
RPS28P62857 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.58□□□□□ -2.16
RPS28P62857 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
RPS28P62857 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC1.58□□□□□ -2.16
RPS28P62857 AL020997.2-201ENST00000602607 184 ntBASIC1.58□□□□□ -2.16
RPS28P62857 AC021851.1-201ENST00000608537 1082 ntBASIC1.58□□□□□ -2.16
RPS28P62857 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
RPS28P62857 AC005296.1-201ENST00000616145 209 ntBASIC1.58□□□□□ -2.16
RPS28P62857 AC084757.4-201ENST00000616350 526 ntBASIC1.58□□□□□ -2.16
RPS28P62857 MIR6834-201ENST00000622807 81 ntBASIC1.58□□□□□ -2.16
RPS28P62857 AC244517.12-201ENST00000623581 663 ntBASIC1.58□□□□□ -2.16
RPS28P62857 AC026422.1-201ENST00000623961 452 ntBASIC1.58□□□□□ -2.16
RPS28P62857 AC068057.2-201ENST00000624047 895 ntBASIC1.58□□□□□ -2.16
RPS28P62857 AC091925.2-201ENST00000625059 256 ntBASIC1.58□□□□□ -2.16
RPS28P62857 AL590396.2-201ENST00000636511 1041 ntBASIC1.58□□□□□ -2.16
RPS28P62857 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
RPS28P62857 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.58□□□□□ -2.16
RPS28P62857 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
RPS28P62857 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC1.57□□□□□ -2.16
RPS28P62857 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.57□□□□□ -2.16
RPS28P62857 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC1.57□□□□□ -2.16
RPS28P62857 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
RPS28P62857 RNU6-543P-201ENST00000362576 108 ntBASIC1.57□□□□□ -2.16
RPS28P62857 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RPS28P62857 MIR7-1-201ENST00000384871 110 ntBASIC1.57□□□□□ -2.16
RPS28P62857 MIR27A-201ENST00000385073 78 ntBASIC1.57□□□□□ -2.16
RPS28P62857 TAF9BP2-201ENST00000400856 499 ntBASIC1.57□□□□□ -2.16
RPS28P62857 ATP5F1P6-201ENST00000402768 767 ntBASIC1.57□□□□□ -2.16
RPS28P62857 AL391361.1-201ENST00000405580 489 ntBASIC1.57□□□□□ -2.16
RPS28P62857 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC1.57□□□□□ -2.16
RPS28P62857 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC1.57□□□□□ -2.16
RPS28P62857 PNRC2P1-201ENST00000423940 420 ntBASIC1.57□□□□□ -2.16
RPS28P62857 AL009174.1-201ENST00000426577 416 ntBASIC1.57□□□□□ -2.16
RPS28P62857 AC011998.1-201ENST00000433403 117 ntBASIC1.57□□□□□ -2.16
RPS28P62857 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC1.57□□□□□ -2.16
RPS28P62857 RPS3AP12-201ENST00000443616 753 ntBASIC1.57□□□□□ -2.16
RPS28P62857 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC1.57□□□□□ -2.16
RPS28P62857 DNAJC19P8-201ENST00000452887 259 ntBASIC1.57□□□□□ -2.16
RPS28P62857 Z95152.1-201ENST00000453556 656 ntBASIC1.57□□□□□ -2.16
RPS28P62857 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.57□□□□□ -2.16
RPS28P62857 RPL35AP19-201ENST00000469425 329 ntBASIC1.57□□□□□ -2.16
RPS28P62857 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.57□□□□□ -2.16
RPS28P62857 RPS29P2-201ENST00000479278 136 ntBASIC1.57□□□□□ -2.16
RPS28P62857 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.57□□□□□ -2.16
RPS28P62857 AC104435.1-201ENST00000483483 166 ntBASIC1.57□□□□□ -2.16
RPS28P62857 SNRPCP11-201ENST00000492453 205 ntBASIC1.57□□□□□ -2.16
RPS28P62857 AC093767.1-201ENST00000504523 156 ntBASIC1.57□□□□□ -2.16
RPS28P62857 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.57□□□□□ -2.16
RPS28P62857 AC108475.1-201ENST00000507880 950 ntBASIC1.57□□□□□ -2.16
RPS28P62857 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC1.57□□□□□ -2.16
RPS28P62857 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.57□□□□□ -2.16
RPS28P62857 AC022447.1-201ENST00000515358 464 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms