Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.01□□□□□ -2.09
LSM3P62310 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.01□□□□□ -2.09
LSM3P62310 RPL23AP15-201ENST00000450202 459 ntBASIC2.01□□□□□ -2.09
LSM3P62310 AL021397.1-201ENST00000451806 248 ntBASIC2.01□□□□□ -2.09
LSM3P62310 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.01□□□□□ -2.09
LSM3P62310 AC109486.1-201ENST00000486833 374 ntBASIC2.01□□□□□ -2.09
LSM3P62310 NAMPTP2-201ENST00000505629 1115 ntBASIC2.01□□□□□ -2.09
LSM3P62310 RNA5SP364-201ENST00000516938 78 ntBASIC2.01□□□□□ -2.09
LSM3P62310 AC093014.1-201ENST00000548926 724 ntBASIC2.01□□□□□ -2.09
LSM3P62310 NOP56P3-201ENST00000549457 385 ntBASIC2.01□□□□□ -2.09
LSM3P62310 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.01□□□□□ -2.09
LSM3P62310 AC074029.1-201ENST00000552531 1044 ntBASIC2.01□□□□□ -2.09
LSM3P62310 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.01□□□□□ -2.09
LSM3P62310 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.01□□□□□ -2.09
LSM3P62310 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.01□□□□□ -2.09
LSM3P62310 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.01□□□□□ -2.09
LSM3P62310 AL009028.1-201ENST00000604895 802 ntBASIC2.01□□□□□ -2.09
LSM3P62310 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.01□□□□□ -2.09
LSM3P62310 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.01□□□□□ -2.09
LSM3P62310 AL161637.1-201ENST00000622380 412 ntBASIC2.01□□□□□ -2.09
LSM3P62310 MIR6766-201ENST00000622641 72 ntBASIC2.01□□□□□ -2.09
LSM3P62310 MIR1291-201ENST00000627649 87 ntBASIC2.01□□□□□ -2.09
LSM3P62310 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
LSM3P62310 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
LSM3P62310 SAGE4P-201ENST00000442271 3381 ntBASIC2.01□□□□□ -2.09
LSM3P62310 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2□□□□□ -2.09
LSM3P62310 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
LSM3P62310 RNU6-98P-201ENST00000384173 107 ntBASIC2□□□□□ -2.09
LSM3P62310 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2□□□□□ -2.09
LSM3P62310 RPS4XP7-201ENST00000406274 780 ntBASIC2□□□□□ -2.09
LSM3P62310 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2□□□□□ -2.09
LSM3P62310 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2□□□□□ -2.09
LSM3P62310 HMGN2P38-201ENST00000423806 265 ntBASIC2□□□□□ -2.09
LSM3P62310 AC079780.1-201ENST00000428259 207 ntBASIC2□□□□□ -2.09
LSM3P62310 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2□□□□□ -2.09
LSM3P62310 AL512649.1-201ENST00000428997 581 ntBASIC2□□□□□ -2.09
LSM3P62310 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2□□□□□ -2.09
LSM3P62310 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2□□□□□ -2.09
LSM3P62310 PRSS3P4-201ENST00000453323 162 ntBASIC2□□□□□ -2.09
LSM3P62310 AP001992.1-205ENST00000462248 379 ntBASIC2□□□□□ -2.09
LSM3P62310 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2□□□□□ -2.09
LSM3P62310 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2□□□□□ -2.09
LSM3P62310 AC008565.1-201ENST00000509046 885 ntBASIC2□□□□□ -2.09
LSM3P62310 VTRNA2-2P-201ENST00000516091 103 ntBASIC2□□□□□ -2.09
LSM3P62310 RNU1-40P-201ENST00000516816 164 ntBASIC2□□□□□ -2.09
LSM3P62310 RNU1-97P-201ENST00000516872 164 ntBASIC2□□□□□ -2.09
LSM3P62310 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2□□□□□ -2.09
LSM3P62310 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2□□□□□ -2.09
LSM3P62310 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2□□□□□ -2.09
LSM3P62310 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2□□□□□ -2.09
LSM3P62310 AC090751.1-201ENST00000566966 267 ntBASIC2□□□□□ -2.09
LSM3P62310 AC025281.1-201ENST00000567026 265 ntBASIC2□□□□□ -2.09
LSM3P62310 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2□□□□□ -2.09
LSM3P62310 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2□□□□□ -2.09
LSM3P62310 LRRC37A5P-203ENST00000580181 585 ntBASIC2□□□□□ -2.09
LSM3P62310 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2□□□□□ -2.09
LSM3P62310 MIR4448-201ENST00000584360 86 ntBASIC2□□□□□ -2.09
LSM3P62310 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2□□□□□ -2.09
LSM3P62310 AC092954.1-201ENST00000609121 445 ntBASIC2□□□□□ -2.09
LSM3P62310 AC006329.2-201ENST00000611491 394 ntBASIC2□□□□□ -2.09
LSM3P62310 AC007275.1-201ENST00000621243 671 ntBASIC2□□□□□ -2.09
LSM3P62310 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2□□□□□ -2.09
LSM3P62310 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2□□□□□ -2.09
LSM3P62310 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.99□□□□□ -2.09
LSM3P62310 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
LSM3P62310 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
LSM3P62310 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
LSM3P62310 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
LSM3P62310 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
LSM3P62310 AC073264.1-201ENST00000411508 416 ntBASIC1.99□□□□□ -2.09
LSM3P62310 HMGB1P11-201ENST00000413899 637 ntBASIC1.99□□□□□ -2.09
LSM3P62310 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.99□□□□□ -2.09
LSM3P62310 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.99□□□□□ -2.09
LSM3P62310 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.99□□□□□ -2.09
LSM3P62310 AP000936.2-201ENST00000447151 681 ntBASIC1.99□□□□□ -2.09
LSM3P62310 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.99□□□□□ -2.09
LSM3P62310 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.99□□□□□ -2.09
LSM3P62310 AC004263.1-201ENST00000479327 332 ntBASIC1.99□□□□□ -2.09
LSM3P62310 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.99□□□□□ -2.09
LSM3P62310 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.99□□□□□ -2.09
LSM3P62310 MTND3P24-201ENST00000506306 329 ntBASIC1.99□□□□□ -2.09
LSM3P62310 AC025755.1-201ENST00000521306 278 ntBASIC1.99□□□□□ -2.09
LSM3P62310 AC139103.1-201ENST00000534696 1030 ntBASIC1.99□□□□□ -2.09
LSM3P62310 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC1.99□□□□□ -2.09
LSM3P62310 AC090666.1-201ENST00000578241 445 ntBASIC1.99□□□□□ -2.09
LSM3P62310 SNORD53-201ENST00000579969 78 ntBASIC1.99□□□□□ -2.09
LSM3P62310 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.99□□□□□ -2.09
LSM3P62310 AC245036.5-201ENST00000596330 847 ntBASIC1.99□□□□□ -2.09
LSM3P62310 AC009220.3-201ENST00000604318 586 ntBASIC1.99□□□□□ -2.09
LSM3P62310 AC019159.1-201ENST00000605094 187 ntBASIC1.99□□□□□ -2.09
LSM3P62310 AC024560.3-201ENST00000608482 349 ntBASIC1.99□□□□□ -2.09
LSM3P62310 AC009570.1-201ENST00000609599 745 ntBASIC1.99□□□□□ -2.09
LSM3P62310 AC008083.4-201ENST00000615076 444 ntBASIC1.99□□□□□ -2.09
LSM3P62310 AL590410.1-201ENST00000617925 333 ntBASIC1.99□□□□□ -2.09
LSM3P62310 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC1.99□□□□□ -2.09
LSM3P62310 AC016717.3-201ENST00000624730 554 ntBASIC1.99□□□□□ -2.09
LSM3P62310 BX649567.1-201ENST00000642071 1134 ntBASIC1.99□□□□□ -2.09
LSM3P62310 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC1.99□□□□□ -2.09
LSM3P62310 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.99□□□□□ -2.09
LSM3P62310 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms