Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LMO4P61968 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
LMO4P61968 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.18□□□□□ -1.9
LMO4P61968 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LMO4P61968 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LMO4P61968 RNA5SP119-201ENST00000362715 117 ntBASIC3.18□□□□□ -1.9
LMO4P61968 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.18□□□□□ -1.9
LMO4P61968 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.18□□□□□ -1.9
LMO4P61968 RNU6-1226P-201ENST00000384317 107 ntBASIC3.18□□□□□ -1.9
LMO4P61968 RNU6-921P-201ENST00000384361 107 ntBASIC3.18□□□□□ -1.9
LMO4P61968 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
LMO4P61968 MIR708-201ENST00000390708 88 ntBASIC3.18□□□□□ -1.9
LMO4P61968 RPL23AP29-201ENST00000397284 453 ntBASIC3.18□□□□□ -1.9
LMO4P61968 MIR1284-201ENST00000408337 120 ntBASIC3.18□□□□□ -1.9
LMO4P61968 RNA5SP239-201ENST00000410218 129 ntBASIC3.18□□□□□ -1.9
LMO4P61968 RNA5SP44-201ENST00000410446 133 ntBASIC3.18□□□□□ -1.9
LMO4P61968 SYF2P2-201ENST00000417620 583 ntBASIC3.18□□□□□ -1.9
LMO4P61968 AC009237.2-201ENST00000421358 284 ntBASIC3.18□□□□□ -1.9
LMO4P61968 AC006946.1-201ENST00000429106 328 ntBASIC3.18□□□□□ -1.9
LMO4P61968 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.18□□□□□ -1.9
LMO4P61968 MTND1P2-201ENST00000430604 821 ntBASIC3.18□□□□□ -1.9
LMO4P61968 FTH1P6-201ENST00000430768 320 ntBASIC3.18□□□□□ -1.9
LMO4P61968 AL365184.2-201ENST00000431139 435 ntBASIC3.18□□□□□ -1.9
LMO4P61968 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.18□□□□□ -1.9
LMO4P61968 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
LMO4P61968 UBE2V1P8-201ENST00000437166 265 ntBASIC3.18□□□□□ -1.9
LMO4P61968 DNAJC19P4-201ENST00000440115 345 ntBASIC3.18□□□□□ -1.9
LMO4P61968 AC069285.2-201ENST00000440210 275 ntBASIC3.18□□□□□ -1.9
LMO4P61968 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.18□□□□□ -1.9
LMO4P61968 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.18□□□□□ -1.9
LMO4P61968 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.18□□□□□ -1.9
LMO4P61968 FGF7P6-202ENST00000451282 293 ntBASIC3.18□□□□□ -1.9
LMO4P61968 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.18□□□□□ -1.9
LMO4P61968 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.18□□□□□ -1.9
LMO4P61968 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.18□□□□□ -1.9
LMO4P61968 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.18□□□□□ -1.9
LMO4P61968 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LMO4P61968 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.18□□□□□ -1.9
LMO4P61968 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.18□□□□□ -1.9
LMO4P61968 AC109464.2-201ENST00000510242 943 ntBASIC3.18□□□□□ -1.9
LMO4P61968 RNU6-718P-201ENST00000516166 105 ntBASIC3.18□□□□□ -1.9
LMO4P61968 AC007991.1-201ENST00000522680 631 ntBASIC3.18□□□□□ -1.9
LMO4P61968 OR4R3P-201ENST00000525084 838 ntBASIC3.18□□□□□ -1.9
LMO4P61968 MTND4LP18-201ENST00000526864 291 ntBASIC3.18□□□□□ -1.9
LMO4P61968 AP001189.2-201ENST00000527320 189 ntBASIC3.18□□□□□ -1.9
LMO4P61968 AC022882.1-201ENST00000532142 501 ntBASIC3.18□□□□□ -1.9
LMO4P61968 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.18□□□□□ -1.9
LMO4P61968 CBX3P7-201ENST00000532876 502 ntBASIC3.18□□□□□ -1.9
LMO4P61968 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.18□□□□□ -1.9
LMO4P61968 GNRHR2P1-201ENST00000555315 631 ntBASIC3.18□□□□□ -1.9
LMO4P61968 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.18□□□□□ -1.9
LMO4P61968 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.18□□□□□ -1.9
LMO4P61968 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.18□□□□□ -1.9
LMO4P61968 AC138915.2-201ENST00000569776 97 ntBASIC3.18□□□□□ -1.9
LMO4P61968 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.18□□□□□ -1.9
LMO4P61968 MIR4528-201ENST00000577763 90 ntBASIC3.18□□□□□ -1.9
LMO4P61968 AL034408.1-202ENST00000636088 415 ntBASIC3.18□□□□□ -1.9
LMO4P61968 MKKS-204ENST00000639674 192 ntBASIC3.18□□□□□ -1.9
LMO4P61968 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LMO4P61968 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.18□□□□□ -1.9
LMO4P61968 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.18□□□□□ -1.9
LMO4P61968 AC011266.1-201ENST00000624119 3569 ntBASIC3.18□□□□□ -1.9
LMO4P61968 MTCO1P23-201ENST00000415223 1526 ntBASIC3.18□□□□□ -1.9
LMO4P61968 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
LMO4P61968 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.18□□□□□ -1.9
LMO4P61968 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.17□□□□□ -1.9
LMO4P61968 CR848007.1-201ENST00000442354 1699 ntBASIC3.17□□□□□ -1.9
LMO4P61968 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
LMO4P61968 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LMO4P61968 MTCO1P14-201ENST00000441695 1559 ntBASIC3.17□□□□□ -1.9
LMO4P61968 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LMO4P61968 AC024560.2-201ENST00000507981 1497 ntBASIC3.17□□□□□ -1.9
LMO4P61968 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.17□□□□□ -1.9
LMO4P61968 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LMO4P61968 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LMO4P61968 RNU1-108P-201ENST00000362556 161 ntBASIC3.17□□□□□ -1.9
LMO4P61968 RNU6-582P-201ENST00000362989 107 ntBASIC3.17□□□□□ -1.9
LMO4P61968 RNU6-433P-201ENST00000363216 104 ntBASIC3.17□□□□□ -1.9
LMO4P61968 RN7SKP44-201ENST00000363602 316 ntBASIC3.17□□□□□ -1.9
LMO4P61968 RNU6-501P-201ENST00000364072 100 ntBASIC3.17□□□□□ -1.9
LMO4P61968 RNA5SP88-201ENST00000365560 109 ntBASIC3.17□□□□□ -1.9
LMO4P61968 RNU6-259P-201ENST00000383999 107 ntBASIC3.17□□□□□ -1.9
LMO4P61968 MIR649-201ENST00000384843 97 ntBASIC3.17□□□□□ -1.9
LMO4P61968 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LMO4P61968 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.17□□□□□ -1.9
LMO4P61968 AC093698.1-201ENST00000423843 571 ntBASIC3.17□□□□□ -1.9
LMO4P61968 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.17□□□□□ -1.9
LMO4P61968 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.17□□□□□ -1.9
LMO4P61968 AC091286.1-201ENST00000431233 461 ntBASIC3.17□□□□□ -1.9
LMO4P61968 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.17□□□□□ -1.9
LMO4P61968 UBE2FP3-201ENST00000436366 524 ntBASIC3.17□□□□□ -1.9
LMO4P61968 AL121601.2-201ENST00000438019 707 ntBASIC3.17□□□□□ -1.9
LMO4P61968 AL671855.1-201ENST00000446875 1203 ntBASIC3.17□□□□□ -1.9
LMO4P61968 VN1R10P-201ENST00000447106 875 ntBASIC3.17□□□□□ -1.9
LMO4P61968 AC003071.1-201ENST00000451219 789 ntBASIC3.17□□□□□ -1.9
LMO4P61968 UBDP1-202ENST00000457888 382 ntBASIC3.17□□□□□ -1.9
LMO4P61968 snoU13.22-201ENST00000459428 104 ntBASIC3.17□□□□□ -1.9
LMO4P61968 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
LMO4P61968 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.17□□□□□ -1.9
LMO4P61968 AC010307.1-201ENST00000467206 836 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms