Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SUMO3P55854 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SUMO3P55854 AC012020.1-201ENST00000624541 1728 ntBASIC4.15□□□□□ -1.74
SUMO3P55854 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
SUMO3P55854 LINC00622-201ENST00000562811 1570 ntBASIC4.15□□□□□ -1.74
SUMO3P55854 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.15□□□□□ -1.74
SUMO3P55854 AL157700.1-201ENST00000561973 1432 ntBASIC4.15□□□□□ -1.74
SUMO3P55854 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.15□□□□□ -1.74
SUMO3P55854 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SUMO3P55854 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.15□□□□□ -1.74
SUMO3P55854 TAB3P1-202ENST00000452645 1634 ntBASIC4.15□□□□□ -1.74
SUMO3P55854 AC021146.4-201ENST00000309229 279 ntBASIC4.15□□□□□ -1.75
SUMO3P55854 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.15□□□□□ -1.75
SUMO3P55854 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.15□□□□□ -1.75
SUMO3P55854 RNU6-1097P-201ENST00000363586 107 ntBASIC4.15□□□□□ -1.75
SUMO3P55854 SNORD113.2-201ENST00000364166 89 ntBASIC4.15□□□□□ -1.75
SUMO3P55854 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.15□□□□□ -1.75
SUMO3P55854 RNU6-1181P-201ENST00000384191 106 ntBASIC4.15□□□□□ -1.75
SUMO3P55854 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
SUMO3P55854 MIR548F1-201ENST00000408667 84 ntBASIC4.15□□□□□ -1.75
SUMO3P55854 RNA5SP107-201ENST00000411358 122 ntBASIC4.15□□□□□ -1.75
SUMO3P55854 RPL7AP73-201ENST00000413490 353 ntBASIC4.15□□□□□ -1.75
SUMO3P55854 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.15□□□□□ -1.75
SUMO3P55854 MTCO1P39-201ENST00000426148 480 ntBASIC4.15□□□□□ -1.75
SUMO3P55854 AL732292.1-201ENST00000426692 226 ntBASIC4.15□□□□□ -1.75
SUMO3P55854 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.15□□□□□ -1.75
SUMO3P55854 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.15□□□□□ -1.75
SUMO3P55854 UBE2V1P8-201ENST00000437166 265 ntBASIC4.15□□□□□ -1.75
SUMO3P55854 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.15□□□□□ -1.75
SUMO3P55854 AL162389.1-201ENST00000449233 177 ntBASIC4.15□□□□□ -1.75
SUMO3P55854 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.15□□□□□ -1.75
SUMO3P55854 RPL38P1-201ENST00000460914 211 ntBASIC4.15□□□□□ -1.75
SUMO3P55854 AP000873.1-201ENST00000463987 400 ntBASIC4.15□□□□□ -1.75
SUMO3P55854 RPL12P20-201ENST00000475538 479 ntBASIC4.15□□□□□ -1.75
SUMO3P55854 RPS3AP14-201ENST00000483907 780 ntBASIC4.15□□□□□ -1.75
SUMO3P55854 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.15□□□□□ -1.75
SUMO3P55854 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.15□□□□□ -1.75
SUMO3P55854 AC114797.1-201ENST00000514003 728 ntBASIC4.15□□□□□ -1.75
SUMO3P55854 RNU2-10P-201ENST00000516375 211 ntBASIC4.15□□□□□ -1.75
SUMO3P55854 RNU6-64P-201ENST00000517119 105 ntBASIC4.15□□□□□ -1.75
SUMO3P55854 AC100870.1-201ENST00000522035 505 ntBASIC4.15□□□□□ -1.75
SUMO3P55854 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.15□□□□□ -1.75
SUMO3P55854 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.15□□□□□ -1.75
SUMO3P55854 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SUMO3P55854 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SUMO3P55854 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.15□□□□□ -1.75
SUMO3P55854 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.15□□□□□ -1.75
SUMO3P55854 AC128657.1-201ENST00000549459 145 ntBASIC4.15□□□□□ -1.75
SUMO3P55854 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.15□□□□□ -1.75
SUMO3P55854 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.15□□□□□ -1.75
SUMO3P55854 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.15□□□□□ -1.75
SUMO3P55854 BPIFA4P-203ENST00000603168 689 ntBASIC4.15□□□□□ -1.75
SUMO3P55854 AC119501.1-201ENST00000603646 475 ntBASIC4.15□□□□□ -1.75
SUMO3P55854 AL139286.1-201ENST00000604465 483 ntBASIC4.15□□□□□ -1.75
SUMO3P55854 AC017083.3-201ENST00000609955 700 ntBASIC4.15□□□□□ -1.75
SUMO3P55854 TUG1_2.1-201ENST00000614234 87 ntBASIC4.15□□□□□ -1.75
SUMO3P55854 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.15□□□□□ -1.75
SUMO3P55854 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SUMO3P55854 AC010300.1-201ENST00000600671 5134 ntBASIC4.15□□□□□ -1.75
SUMO3P55854 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SUMO3P55854 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.15□□□□□ -1.75
SUMO3P55854 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SUMO3P55854 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SUMO3P55854 CPHL1P-201ENST00000461341 3407 ntBASIC4.14□□□□□ -1.75
SUMO3P55854 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
SUMO3P55854 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
SUMO3P55854 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SUMO3P55854 AC116667.1-201ENST00000604855 2072 ntBASIC4.14□□□□□ -1.75
SUMO3P55854 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.14□□□□□ -1.75
SUMO3P55854 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SUMO3P55854 AC079741.1-201ENST00000321498 212 ntBASIC4.14□□□□□ -1.75
SUMO3P55854 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SUMO3P55854 SNORD56.2-201ENST00000363242 71 ntBASIC4.14□□□□□ -1.75
SUMO3P55854 RNU6-108P-201ENST00000365558 107 ntBASIC4.14□□□□□ -1.75
SUMO3P55854 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SUMO3P55854 MIR708-201ENST00000390708 88 ntBASIC4.14□□□□□ -1.75
SUMO3P55854 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SUMO3P55854 RPS3AP24-201ENST00000407896 734 ntBASIC4.14□□□□□ -1.75
SUMO3P55854 RN7SKP159-201ENST00000410657 292 ntBASIC4.14□□□□□ -1.75
SUMO3P55854 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.14□□□□□ -1.75
SUMO3P55854 UBE2FP1-201ENST00000416536 447 ntBASIC4.14□□□□□ -1.75
SUMO3P55854 TOMM22P1-201ENST00000418578 312 ntBASIC4.14□□□□□ -1.75
SUMO3P55854 PPP1R11P2-201ENST00000423543 382 ntBASIC4.14□□□□□ -1.75
SUMO3P55854 MTCYBP5-201ENST00000423752 1135 ntBASIC4.14□□□□□ -1.75
SUMO3P55854 USP9YP18-201ENST00000425912 695 ntBASIC4.14□□□□□ -1.75
SUMO3P55854 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.14□□□□□ -1.75
SUMO3P55854 AL359073.1-201ENST00000448036 403 ntBASIC4.14□□□□□ -1.75
SUMO3P55854 AC010285.1-201ENST00000470580 392 ntBASIC4.14□□□□□ -1.75
SUMO3P55854 RPL35P6-201ENST00000490024 372 ntBASIC4.14□□□□□ -1.75
SUMO3P55854 AC110792.1-201ENST00000491826 472 ntBASIC4.14□□□□□ -1.75
SUMO3P55854 KLHL2P1-201ENST00000508691 521 ntBASIC4.14□□□□□ -1.75
SUMO3P55854 AC090572.1-201ENST00000519251 160 ntBASIC4.14□□□□□ -1.75
SUMO3P55854 AP000827.1-201ENST00000527814 258 ntBASIC4.14□□□□□ -1.75
SUMO3P55854 AP003034.1-201ENST00000534621 422 ntBASIC4.14□□□□□ -1.75
SUMO3P55854 AP006289.1-201ENST00000538089 277 ntBASIC4.14□□□□□ -1.75
SUMO3P55854 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.14□□□□□ -1.75
SUMO3P55854 CCNG2P1-201ENST00000549521 1000 ntBASIC4.14□□□□□ -1.75
SUMO3P55854 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.14□□□□□ -1.75
SUMO3P55854 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.14□□□□□ -1.75
SUMO3P55854 AC105224.1-201ENST00000587055 421 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms