Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC022069.1-201ENST00000582910 658 ntBASIC3.54□□□□□ -1.84
VCPP55072 MIR4276-201ENST00000584832 70 ntBASIC3.54□□□□□ -1.84
VCPP55072 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.54□□□□□ -1.84
VCPP55072 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.54□□□□□ -1.84
VCPP55072 AC024933.1-201ENST00000608472 348 ntBASIC3.54□□□□□ -1.84
VCPP55072 AC006963.1-201ENST00000624003 1052 ntBASIC3.54□□□□□ -1.84
VCPP55072 AP003485.1-201ENST00000625093 753 ntBASIC3.54□□□□□ -1.84
VCPP55072 AC127502.3-201ENST00000636170 1206 ntBASIC3.54□□□□□ -1.84
VCPP55072 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.54□□□□□ -1.84
VCPP55072 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VCPP55072 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.53□□□□□ -1.84
VCPP55072 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.53□□□□□ -1.84
VCPP55072 AL355578.1-201ENST00000607405 1328 ntBASIC3.53□□□□□ -1.84
VCPP55072 RNU5E-10P-201ENST00000363506 118 ntBASIC3.53□□□□□ -1.84
VCPP55072 RNU1-140P-201ENST00000365040 165 ntBASIC3.53□□□□□ -1.84
VCPP55072 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.53□□□□□ -1.84
VCPP55072 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.53□□□□□ -1.84
VCPP55072 DEFB109C-201ENST00000382575 264 ntBASIC3.53□□□□□ -1.84
VCPP55072 DEFB109B-201ENST00000382656 264 ntBASIC3.53□□□□□ -1.84
VCPP55072 RNU6-444P-201ENST00000383988 108 ntBASIC3.53□□□□□ -1.84
VCPP55072 SKINT1L-201ENST00000401057 817 ntBASIC3.53□□□□□ -1.84
VCPP55072 AL138885.1-201ENST00000405921 675 ntBASIC3.53□□□□□ -1.84
VCPP55072 RNA5SP56-201ENST00000410277 118 ntBASIC3.53□□□□□ -1.84
VCPP55072 AC126124.2-201ENST00000413542 321 ntBASIC3.53□□□□□ -1.84
VCPP55072 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.53□□□□□ -1.84
VCPP55072 AL356968.1-201ENST00000416622 474 ntBASIC3.53□□□□□ -1.84
VCPP55072 MTND4P3-201ENST00000417829 541 ntBASIC3.53□□□□□ -1.84
VCPP55072 AC013410.2-201ENST00000422627 201 ntBASIC3.53□□□□□ -1.84
VCPP55072 AL353678.1-201ENST00000422735 741 ntBASIC3.53□□□□□ -1.84
VCPP55072 HIGD1AP11-201ENST00000438361 280 ntBASIC3.53□□□□□ -1.84
VCPP55072 MTCYBP42-201ENST00000444653 1130 ntBASIC3.53□□□□□ -1.84
VCPP55072 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.53□□□□□ -1.84
VCPP55072 Y_RNA.638-201ENST00000459374 113 ntBASIC3.53□□□□□ -1.84
VCPP55072 GAPDHP39-201ENST00000481866 979 ntBASIC3.53□□□□□ -1.84
VCPP55072 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.53□□□□□ -1.84
VCPP55072 AC093752.1-206ENST00000511823 336 ntBASIC3.53□□□□□ -1.84
VCPP55072 FABP5P12-201ENST00000515543 389 ntBASIC3.53□□□□□ -1.84
VCPP55072 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.53□□□□□ -1.84
VCPP55072 MTCO3P15-201ENST00000526563 574 ntBASIC3.53□□□□□ -1.84
VCPP55072 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VCPP55072 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.53□□□□□ -1.84
VCPP55072 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.53□□□□□ -1.84
VCPP55072 AL845331.3-202ENST00000562856 261 ntBASIC3.53□□□□□ -1.84
VCPP55072 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.53□□□□□ -1.84
VCPP55072 AC012182.1-201ENST00000570133 895 ntBASIC3.53□□□□□ -1.84
VCPP55072 AC008507.1-201ENST00000587506 734 ntBASIC3.53□□□□□ -1.84
VCPP55072 AC069431.2-201ENST00000604149 1099 ntBASIC3.53□□□□□ -1.84
VCPP55072 AL162713.1-201ENST00000604480 262 ntBASIC3.53□□□□□ -1.84
VCPP55072 AL583856.2-201ENST00000606298 543 ntBASIC3.53□□□□□ -1.84
VCPP55072 AL121652.1-201ENST00000608851 448 ntBASIC3.53□□□□□ -1.84
VCPP55072 AP005137.2-201ENST00000609238 400 ntBASIC3.53□□□□□ -1.84
VCPP55072 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.53□□□□□ -1.84
VCPP55072 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.53□□□□□ -1.84
VCPP55072 AC017071.1-201ENST00000564407 2204 ntBASIC3.53□□□□□ -1.84
VCPP55072 AC007496.3-201ENST00000624987 3443 ntBASIC3.53□□□□□ -1.84
VCPP55072 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
VCPP55072 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.52□□□□□ -1.85
VCPP55072 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
VCPP55072 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.52□□□□□ -1.85
VCPP55072 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VCPP55072 Z83843.1-201ENST00000604070 3685 ntBASIC3.52□□□□□ -1.85
VCPP55072 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
VCPP55072 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.52□□□□□ -1.85
VCPP55072 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
VCPP55072 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.52□□□□□ -1.85
VCPP55072 RN7SKP111-201ENST00000410349 271 ntBASIC3.52□□□□□ -1.85
VCPP55072 RPS7P13-201ENST00000413955 498 ntBASIC3.52□□□□□ -1.85
VCPP55072 AC009237.2-201ENST00000421358 284 ntBASIC3.52□□□□□ -1.85
VCPP55072 AC233981.1-201ENST00000423224 461 ntBASIC3.52□□□□□ -1.85
VCPP55072 RPP40P1-201ENST00000426762 456 ntBASIC3.52□□□□□ -1.85
VCPP55072 MTCYBP32-201ENST00000427945 1084 ntBASIC3.52□□□□□ -1.85
VCPP55072 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.52□□□□□ -1.85
VCPP55072 MRPL42P4-201ENST00000453267 443 ntBASIC3.52□□□□□ -1.85
VCPP55072 AC104308.1-201ENST00000454621 333 ntBASIC3.52□□□□□ -1.85
VCPP55072 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.52□□□□□ -1.85
VCPP55072 HMGN1P18-201ENST00000457642 277 ntBASIC3.52□□□□□ -1.85
VCPP55072 RN7SL442P-201ENST00000473804 320 ntBASIC3.52□□□□□ -1.85
VCPP55072 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.52□□□□□ -1.85
VCPP55072 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.52□□□□□ -1.85
VCPP55072 AC048346.1-201ENST00000510247 144 ntBASIC3.52□□□□□ -1.85
VCPP55072 AC026801.2-201ENST00000515352 425 ntBASIC3.52□□□□□ -1.85
VCPP55072 AP003385.6-201ENST00000531603 374 ntBASIC3.52□□□□□ -1.85
VCPP55072 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.52□□□□□ -1.85
VCPP55072 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.52□□□□□ -1.85
VCPP55072 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.52□□□□□ -1.85
VCPP55072 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.52□□□□□ -1.85
VCPP55072 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.52□□□□□ -1.85
VCPP55072 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.52□□□□□ -1.85
VCPP55072 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.52□□□□□ -1.85
VCPP55072 AL669831.4-202ENST00000590817 238 ntBASIC3.52□□□□□ -1.85
VCPP55072 BDH2P1-201ENST00000602288 736 ntBASIC3.52□□□□□ -1.85
VCPP55072 AC096947.1-201ENST00000603233 470 ntBASIC3.52□□□□□ -1.85
VCPP55072 AC112220.2-201ENST00000605513 533 ntBASIC3.52□□□□□ -1.85
VCPP55072 AC093732.2-201ENST00000607950 274 ntBASIC3.52□□□□□ -1.85
VCPP55072 AC104763.3-201ENST00000613765 618 ntBASIC3.52□□□□□ -1.85
VCPP55072 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.52□□□□□ -1.85
VCPP55072 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.52□□□□□ -1.85
VCPP55072 AC068722.2-201ENST00000618734 544 ntBASIC3.52□□□□□ -1.85
VCPP55072 AC109454.4-201ENST00000623411 649 ntBASIC3.52□□□□□ -1.85
VCPP55072 AC099654.9-201ENST00000637055 678 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms